Gene Information

Name : XNC1_4546 (XNC1_4546)
Accession : YP_003714630.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 4348327 - 4349679 bp
Length : 1353 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGCCGGGTAAAAATCGGGTGATTTGGCACGAAGGATTATTCATCAAACCCCAACATTTTCAGCAACAACAAAAACACAT
TGATTATCTGGCGCATAGCCTGGTTTCCGTGCTGACACCTTATGCGCACGGTTTCAGCTCCCTGAGCATCAATGATGATT
TGCTTAAACTGGGCCGTATCGGGATCACCGAAGCCAGTGGCATTATGCCGGATGGCACCCTATTTGCTGCGCCAAGTCAG
GATTTGCTGCCAAAACCGCTGGATATCGAAAATATCAACGATCTGAAAAGCAAGGACATCTATCTGGCCTTGCCGATGTC
CAGTGATACCATCCGGGAAATTGCTGATCGGGATGCGGAAATACAGAGTGCCGTGCGTTATCGCGAGTTGCCGACGGATG
TCCGTGACCTGCATACCAAAGGCGGCGACGCCTTCGCGCTTAACCTTGCCCAATTGACGCCAGTCCTGATGCAAGGCTCC
GAGGACATGAGCGCTTATACCGCTATTCCGTTGTGCCGCATCAAAGAAAAGCAAAAAGATGGCAATATCGTGCTGGATAA
CGAATTTATTCCGACATGTTTGTCGATCTTTGTGGCGGATAAACTCAAGCGCTTTATGGTGGAAATTGATGGCCTGCTGA
CAGAGCGTTCAAGAACACTGGCTAAACGTATCGGTTCGCCGGGTCAGCAGGGGGTTGCGGATGTGGCTGAGTTTATGATG
CTGCAATTACTGAACCGCGTTCAGCCGCTGTTCAACCATTATGCAAAACAGACCGTTCTGCATCCTTTGTATCTCTATAC
CGAGTTGCTCCAGACTTGTGGCGAACTGAGAACGTTCACCGATGCCAGCCGTTTGCCGGGCAATGTACTGGCATACGATC
ACAATAACCTGACGGATACCTTTCAGGATGCGATGCACGCGATCCGTGACGCCCTGAACGTTGTTCTGACACCACGTGCA
ACGTCGATTGCACTGAAACAGAACGAAGGCGGGATTCGTGTGGCAACGCTCCACGACAACGATCTGTTGCGCAAAGCCGA
ATTTGTACTGGCAATCAGCGCCAGCACACCGCAGGAACAATTGCGTCGTCAGTTCGTCCAGCAAACTAAAGTCACTTCGA
TGGAAAAAATCCGCGATCTGGTCAGCGTACAGTTACCGGGCGTGCCACTGATTGCACTGTCCGCAGCGCCTCGCCAGTTG
CCGTACCACTCTGGATATACCTACTTCCGCCTGGATCAGAAGAGCCCGGCATGGAAAGAGATCCAGCAGGGAAATTCCAT
TGCATTCCACGTATCAGGGGATTTCCCTGATTTAGATATGCAGCTCTGGGCTATCAGGGGCGGTAAGGAATAA

Protein sequence :
MPGKNRVIWHEGLFIKPQHFQQQQKHIDYLAHSLVSVLTPYAHGFSSLSINDDLLKLGRIGITEASGIMPDGTLFAAPSQ
DLLPKPLDIENINDLKSKDIYLALPMSSDTIREIADRDAEIQSAVRYRELPTDVRDLHTKGGDAFALNLAQLTPVLMQGS
EDMSAYTAIPLCRIKEKQKDGNIVLDNEFIPTCLSIFVADKLKRFMVEIDGLLTERSRTLAKRIGSPGQQGVADVAEFMM
LQLLNRVQPLFNHYAKQTVLHPLYLYTELLQTCGELRTFTDASRLPGNVLAYDHNNLTDTFQDAMHAIRDALNVVLTPRA
TSIALKQNEGGIRVATLHDNDLLRKAEFVLAISASTPQEQLRRQFVQQTKVTSMEKIRDLVSVQLPGVPLIALSAAPRQL
PYHSGYTYFRLDQKSPAWKEIQQGNSIAFHVSGDFPDLDMQLWAIRGGKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-107 50
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 2e-107 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_4546 YP_003714630.1 hypothetical protein VFG2082 Protein 2e-105 47