Gene Information

Name : XNC1_4407 (XNC1_4407)
Accession : YP_003714493.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3415
EC number : -
Position : 4227586 - 4228407 bp
Length : 822 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
ATGCCAATAATAACATCTATCCCCTACGATGAATGCCAAAAAATGAAAAAACTTATCCATAAAACGCGCGACAAGGACTA
TTCCCGCCGATTAACCGCATTACTGCTGTTAAATGAAGGTGTTACTGTGACGAAAGTCGCTAAAATCCTTCATGCCGCCC
GCTCTTCTGTCAATCGCTGGGTTAAAGGGTTTAGGTTATATGGATTAGAAGGACTCAACAGTTTACCCGCGGGTAGGCCA
GCAGTCTGGGATCTCACTCCTCTCGATAACATCTTGTTTTTCTTATTACAGCAATCACCTCAAGAGTTAGGGTATCTTCG
TTCTCGCTGGAGTCTTGAACTCATAAACAAAACACTGAATGAATTGTTCAATATTTCGCTGACATCAAGCACGCTATATC
GTTATTTCGTTCAGGAGGATATTGTCTGGCGCAGAGCCGCTCCCACAGTGAAACAGCCTGACCCGGAATATAATGAAAAA
ATGGCAAAAATCACGGAAGCGAAAGCGAATATATCAGAAAGACATCCGGTTTTTTATGAAGATGAAGTCGACATTGATTT
AAATCCAAAAATCGGGGCAGATTGGTGTTTCAAAGGCCAGCAAAAACGCATAGTCACACCGGGAAAAAACGAAAAATATT
ATTTGGCGGGCTGCCTCAATGCGCAAACCAAAGAAATCACTTATGTGAAAGGAGAAAAGAAGAATTCTGATTTGTTTATC
AAAATGTTAGATGAACTAAATGCCCGTCATCCTCATGCGGAAACTATCACGTTAATCTTAGATAATGACTGCATTCATAA
AAGTCACAAAGTCAAAAACTGA

Protein sequence :
MPIITSIPYDECQKMKKLIHKTRDKDYSRRLTALLLLNEGVTVTKVAKILHAARSSVNRWVKGFRLYGLEGLNSLPAGRP
AVWDLTPLDNILFFLLQQSPQELGYLRSRWSLELINKTLNELFNISLTSSTLYRYFVQEDIVWRRAAPTVKQPDPEYNEK
MAKITEAKANISERHPVFYEDEVDIDLNPKIGADWCFKGQQKRIVTPGKNEKYYLAGCLNAQTKEITYVKGEKKNSDLFI
KMLDELNARHPHAETITLILDNDCIHKSHKVKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api42 CAF28516.1 DNA binding protein Not tested YAPI Protein 7e-60 57
unnamed AAL67338.1 putative transposase Not tested PAI II CFT073 Protein 5e-48 54
unnamed AAP70294.1 TnpA-like protein Not tested HPI Protein 3e-61 54
tnpA AFL65914.1 transposase Not tested SGI1-J6 Protein 6e-56 50
IS630-like CAI43817.1 putative transposase Not tested LEE Protein 7e-49 49
Z4330 NP_289555.1 transposase Not tested OI-122 Protein 9e-49 49
unnamed AAL57563.1 putative transposase Not tested LEE Protein 7e-49 49
st46 CAC81884.1 ST46 protein Not tested LEE II Protein 7e-49 49