Gene Information

Name : XNC1_4405 (XNC1_4405)
Accession : YP_003714491.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : transposase (TnpA-like protein)
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3335
EC number : -
Position : 4225919 - 4226860 bp
Length : 942 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence :
ATGCTCATGCTGCACGATGGTGATAGTATCAGTCAGGTAGCGAAAACCCTTGCCTGTAGTCGTTCTTCTGTTGGCCGTTG
GGTTAATTGGTATACGCTGTATGGCATAGAAGGCTTGCAGTCATTGCCTTCTGGCCGTCCACGTCAATGGCCCGTTGAAT
CAATTTGTCTCTTATTACGCCAACTTATTTCACACTCTCCTGAAGTCTTTGGTTATCAGCGTTCCCGTTGGAGCAGTGAA
TTACTCGCGATACAAGTCCATGAGATAACCGGATACCCACTCCATGCCTCAACGATACGCCGGTGGTTGCCACAGGCCAA
TATTGTTTGGCGACGGGCTGCACCCACATTGCGAATACATGATCCTCATAAAGAAGAAAAACTGAGGGCAATTAATGATG
CGCTGGAGAAATGCAACCCAGACCATCCGGTCTTTTATGAAGATGAAGTCGATATTCACCTTAACCCCAAAATAGGGGCA
GACTGGCAATTACGTGGACAACAAAAACGGGTTATTACGCCAGGTCAGAATGAGAAATATTATCTGGCAGGGGCCTTACA
CAGTGGCACAGGAAAAGTCAGTTATGTTGGGAGTAATAACAAGGATTCATCATTATTTATCAAACTATTAGCGCATCTGA
AAGCCACCTACCGTCGGGCAAAAAGCATCACCTTGATAGTCGATAACTACATCATTCATAAAAGCCAGAAAACGCAACAG
TGGTTAGCTCAAAACTCTAAATTTCGTTTGATTTATCAACCGATTTATTCGCCATGGATAAACCATATTGAGAAACTATG
GTTAGCCCTTCATGAAACGATTACACGTAATCATTGTTGTCGCTATATGTGGCAATTATTGAGAAAAGTGCGTGGTTTTA
TGGAGACGGTTAGCCCATTTCCGGGAAATAAACATGGCACCGCAAAAGTGTATCAATATTAG

Protein sequence :
MLMLHDGDSISQVAKTLACSRSSVGRWVNWYTLYGIEGLQSLPSGRPRQWPVESICLLLRQLISHSPEVFGYQRSRWSSE
LLAIQVHEITGYPLHASTIRRWLPQANIVWRRAAPTLRIHDPHKEEKLRAINDALEKCNPDHPVFYEDEVDIHLNPKIGA
DWQLRGQQKRVITPGQNEKYYLAGALHSGTGKVSYVGSNNKDSSLFIKLLAHLKATYRRAKSITLIVDNYIIHKSQKTQQ
WLAQNSKFRLIYQPIYSPWINHIEKLWLALHETITRNHCCRYMWQLLRKVRGFMETVSPFPGNKHGTAKVYQY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70294.1 TnpA-like protein Not tested HPI Protein 5e-122 77
Z4330 NP_289555.1 transposase Not tested OI-122 Protein 1e-92 70
unnamed AAL57563.1 putative transposase Not tested LEE Protein 9e-93 70
st46 CAC81884.1 ST46 protein Not tested LEE II Protein 9e-93 70
IS630-like CAI43817.1 putative transposase Not tested LEE Protein 9e-93 70
tnpA AFL65914.1 transposase Not tested SGI1-J6 Protein 2e-93 65
api42 CAF28516.1 DNA binding protein Not tested YAPI Protein 9e-92 61