Gene Information

Name : XNC1_4234 (XNC1_4234)
Accession : YP_003714333.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3415
EC number : -
Position : 4079223 - 4080263 bp
Length : 1041 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 11319082; Product type e : enzyme

DNA sequence :
ATGCCAATCATAGCACCTATACCCCGAAGTGAACGACGTCAGATGAAAAAATTTATTCATAAAACCCGGGATAAAGATTA
TGCACGCCGACTCATGGCACTCTTAATGTTACATGAAGGCAAGACCGTTTCTGCCCTCTCCAGAACCCTTCATTGTTCAC
GTTCTTCGGTTAATCGTTGGATAAATTGGTTTACGTTGTATGGGCTGGAAGGATTAAAAAGTTTACCGTCAGGCAGACCT
GCCACCTGGAATTTAGCGCCACTTTTTAGTTTGCTGTCGTTCTTATTACAGCACTCCCCGCAGGATTTTGGCTGCCTGCG
TTCACGTTGGAGCATTGAGCTGATTACTCGGATAATCCATGAATTATTCGGTTTGTCGCTTTCGAAAAGTACGTTCTATC
GTTACTTCTGTCAGGTCGGTATTGTCTGGCGAAGAGCAGCACCTACTGTAAAAAAGCCTGATCCTGAGTATGACGAAAAA
ATGGCAAAAATCACTGAAGCTTTATCCAGCGTGTCAGAACAACATCCTGTTTTTTACGAAGATGAAGTCGATATTGACCT
TAACCCAAAAATCGGGGCGGACTGGTGTCTGAAAGGGCAACAAAAACGGGTCATGACGCCGGGAAAAAATCAAAAACACT
ACCTTGCGGGCTGCCTTGACGCCCAAACAGGCCGAGTGACTTATGTCAGCGGTATAAAGAAAAATTCTGATTTATTTATC
AACCTGTTAAAGGAACTGAATGGCCAATATCGCCATGTAAAAAACATCACGTTGATTTTAGATAACTATGGCATTCATAA
AAGCCGGAAAGTCGGGGCATGGCGAAAACAAAATCCTAAATTTAATCTGTTGTTTTTACCGGTCTATTCGCCATGGATAA
ATAAGATTGAACGCCTATGGCAATCATTGCATGAAACCGTCACACGGAATCATTGTTGTCAGTATATGTGGCAACTCTTG
AAATGCGTTGAAGCGTTTATTAACGCATTTTCATCAGGGCAGCAACCGGGAATGAGAAAAATGAGTGTATCACTATTATG
A

Protein sequence :
MPIIAPIPRSERRQMKKFIHKTRDKDYARRLMALLMLHEGKTVSALSRTLHCSRSSVNRWINWFTLYGLEGLKSLPSGRP
ATWNLAPLFSLLSFLLQHSPQDFGCLRSRWSIELITRIIHELFGLSLSKSTFYRYFCQVGIVWRRAAPTVKKPDPEYDEK
MAKITEALSSVSEQHPVFYEDEVDIDLNPKIGADWCLKGQQKRVMTPGKNQKHYLAGCLDAQTGRVTYVSGIKKNSDLFI
NLLKELNGQYRHVKNITLILDNYGIHKSRKVGAWRKQNPKFNLLFLPVYSPWINKIERLWQSLHETVTRNHCCQYMWQLL
KCVEAFINAFSSGQQPGMRKMSVSLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api42 CAF28516.1 DNA binding protein Not tested YAPI Protein 6e-88 63
unnamed AAP70294.1 TnpA-like protein Not tested HPI Protein 1e-93 61
Z4330 NP_289555.1 transposase Not tested OI-122 Protein 4e-67 56
unnamed AAL57563.1 putative transposase Not tested LEE Protein 3e-67 56
st46 CAC81884.1 ST46 protein Not tested LEE II Protein 3e-67 56
IS630-like CAI43817.1 putative transposase Not tested LEE Protein 3e-67 56
tnpA AFL65914.1 transposase Not tested SGI1-J6 Protein 1e-87 56