Gene Information

Name : mrxD (XNC1_3800)
Accession : YP_003713923.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : Periplasmic fimbrial chaperone , MrxD
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3656875 - 3657627 bp
Length : 753 bp
Strand : -
Note : Evidence 1a : Function experimentally demonstrated in the studied strain; PubMedId : 15133105; Product type s : structure

DNA sequence :
ATGAAACTGAAAAAATTCTTAATGACAACTGCCATAGCATTAACTGGTTTGATGTCAGTTCATCAGGCAATGGCCGCAAT
AACGTTGGATCGTACTCGAGTCATTTTTAATGGTGATGTGAAATCTGTCAGCCTTAACATTGAAAATCAACATCAGGATC
TGCCTTACTTGGCACAATCGTGGATTGAGGATGAAAAAGGCAATAAGATCAATAGCCCGCTTGTTGTCGTTCCGCCTGTA
CAGCGTGTCGAAGCCGGATCAAAGAGTCAGATTAAGATTCAGACCCTGCCGGCCATCGCTCAGTTACCACAAGACCGAGA
AAGTTTGTTCTATTTCAACGTGCGTGAAATTCCACCACGCAGTGAAAAACCCAATGTATTGCAACTTGCTTTACAAACCC
GCATTAAATTGTTCTACCGTCCTGAAGCTGTTATCGCGCGCCGTGTCGATCTTGATAACCCGTGGCAGGAAAAGCTCACA
CTGACCCGAGAAGGGAACCACTATCTGGTGAATAATCCAACACCTTATTACATCACTCTCTCAGAAGCATCGAATAAGTT
GGAGGGGCAAAGTGTAGAAGGTTTTCAGCCGTTGATGTTGGCACCTAAAAGTAGCGAAAAGCCAGGCGGCACCGTAAATT
CATTGGGAAATACGCCAGTACTGACTTATGTCAATGATTATGGTGGTCATCCGCAGTTAATATTTAGCTGTAGTGGCAAT
ACCTGTACGGTGGCAAAAACCGTGACCGAATAA

Protein sequence :
MKLKKFLMTTAIALTGLMSVHQAMAAITLDRTRVIFNGDVKSVSLNIENQHQDLPYLAQSWIEDEKGNKINSPLVVVPPV
QRVEAGSKSQIKIQTLPAIAQLPQDRESLFYFNVREIPPRSEKPNVLQLALQTRIKLFYRPEAVIARRVDLDNPWQEKLT
LTREGNHYLVNNPTPYYITLSEASNKLEGQSVEGFQPLMLAPKSSEKPGGTVNSLGNTPVLTYVNDYGGHPQLIFSCSGN
TCTVAKTVTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 3e-51 51
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 8e-62 51
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 6e-59 50
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 1e-58 50
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 1e-58 50
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 1e-58 50
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 8e-59 50
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 7e-59 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mrxD YP_003713923.1 Periplasmic fimbrial chaperone , MrxD VFG0885 Protein 1e-51 51
mrxD YP_003713923.1 Periplasmic fimbrial chaperone , MrxD VFG1547 Protein 3e-59 50
mrxD YP_003713923.1 Periplasmic fimbrial chaperone , MrxD VFG0896 Protein 5e-59 50