|
Name : pagC (XNC1_3735) Accession : YP_003713863.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Virulence Product : Virulence membrane protein pagC Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3637 EC number : - Position : 3596659 - 3597237 bp Length : 579 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1846140; Product type m : membrane component DNA sequence : ATGGTGATGAACAAAACACTTTTTACAACGTTAGTTATATCCGGTTTTCTGTATGGTGCACTCGCTTATGCCGATTCGCA TACTGTCGCAGTGGGCTTTGCCCAAAGTAAGGTACAAGATTTCAAACATATTCGTGGAGTTAACCTTCATTATCGTTATG AGTGGGATTATCCAGTCAGTATTATTGGTTCCCTTGCCTATATGAAAGGTAGTGAACATACCCGTTCTACTGGAGAGAAT TATGTTGAAAAAGGGAGTGGTGATGTGAAGTATTATTCATTGATGGTGGGTCCCGCTTATCGTATTAATGATTATGTGAG TATATATGGTTTATTAGGGTTTTCACATTTTAAAGTAGATTATTCTTATCATGAATCTGAAAGGATCAATGATAAAATAT CTTCTTACCACGGAAGTGAAAATAGAAAATCAACTAACTTTGCCTACGGTGCCGGAATTGAAGTTAATCCAATTCAATAC CTCAGCATTTATGCCGGATATGAAGGTTCAGAAGAGAAATTTAATGACAAGAGTTTTAACATTAATGGGTTTAATATCGG TGTGGGCTATCGCTTTTAA Protein sequence : MVMNKTLFTTLVISGFLYGALAYADSHTVAVGFAQSKVQDFKHIRGVNLHYRYEWDYPVSIIGSLAYMKGSEHTRSTGEN YVEKGSGDVKYYSLMVGPAYRINDYVSIYGLLGFSHFKVDYSYHESERINDKISSYHGSENRKSTNFAYGAGIEVNPIQY LSIYAGYEGSEEKFNDKSFNINGFNIGVGYRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z4321 | NP_289546.1 | PagC-like membrane protein | Not tested | OI-122 | Protein | 1e-34 | 50 |
| Z4321 | AAQ19134.1 | putative PagC-like membrane protein | Not tested | PAI I CL3 | Protein | 5e-36 | 50 |
| unnamed | ADD91732.1 | putative PagC-like membrane protein | Not tested | PAI-I AL862 | Protein | 4e-35 | 50 |
| pagC | AGI37341.1 | PagC | Virulence | OI-122 | Protein | 4e-27 | 47 |
| pagC | AGI37349.1 | PagC | Virulence | OI-122 | Protein | 4e-27 | 47 |
| pagC | AGI37352.1 | PagC | Virulence | OI-122 | Protein | 4e-27 | 47 |
| pagC | AGI37347.1 | PagC | Virulence | OI-122 | Protein | 6e-26 | 46 |
| pagC | AGI37343.1 | PagC | Virulence | OI-122 | Protein | 6e-27 | 46 |
| pagC | AGI37337.1 | PagC | Virulence | OI-122 | Protein | 3e-25 | 46 |
| pagC | AGI37353.1 | PagC | Virulence | OI-122 | Protein | 6e-27 | 46 |
| pagC | AGI37342.1 | PagC | Virulence | OI-122 | Protein | 3e-25 | 46 |
| pagC | AGI37348.1 | PagC | Virulence | OI-122 | Protein | 5e-27 | 46 |
| pagC | AGI37344.1 | PagC | Virulence | OI-122 | Protein | 3e-25 | 46 |
| pagC | AGI37346.1 | PagC | Virulence | OI-122 | Protein | 3e-25 | 46 |
| pagC | AGI37350.1 | PagC | Virulence | OI-122 | Protein | 3e-25 | 46 |
| pagC | AGI37340.1 | PagC | Virulence | OI-122 | Protein | 6e-26 | 46 |
| pagC | AGI37351.1 | PagC | Virulence | OI-122 | Protein | 4e-27 | 46 |
| pagC | YP_216243.1 | PhoP regulated protein: reduced macrophage survival | Not tested | SPI-11 | Protein | 1e-27 | 45 |
