Gene Information

Name : XNC1_3680 (XNC1_3680)
Accession : YP_003713810.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3543244 - 3543645 bp
Length : 402 bp
Strand : +
Note : -

DNA sequence :
ATGCGGAAAATAAAATATTATTGGGTGTTGGGGTTGGCAGGGTTACTGGCCGGCTGTACCACCTCGAAAGACGCCTTACT
CCCTGCCGGTGAGCAGACAGTGCTGGCAATGTGGCAGGGAAACAAGGCCGGTCACGCTACTGTATCGGCAAGGCAGATCC
TTCACCGGGCTTTAACCCCATCCGAACGGCTCAGGGCACTGGAAGAACCTTATCATTACAGCCGTTCAGCCGCGCAGGAA
ATCAGCCAGCAATTTCCCCGCTTACCCAATCCCGATATGGTGATGTACGTCTATCCGCATCTGGTTGCCGGCAACACGCC
GATACCGGGCTACAGTACGGTATTCCCGTTTTACAGCCAAGTACAATATGCCCTGCCGGGTGAACGCACGGAGGCACTAT
AA

Protein sequence :
MRKIKYYWVLGLAGLLAGCTTSKDALLPAGEQTVLAMWQGNKAGHATVSARQILHRALTPSERLRALEEPYHYSRSAAQE
ISQQFPRLPNPDMVMYVYPHLVAGNTPIPGYSTVFPFYSQVQYALPGERTEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 3e-33 60
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 3e-33 60
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 2e-30 58
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 5e-27 56
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 1e-26 55
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 5e-25 55
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-26 50
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 8e-24 48
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-24 48
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-26 48
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 3e-24 47
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 2e-20 46
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 9e-24 45