|
Name : dnaB (XNC1_3642) Accession : YP_003713774.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Unknown Product : replicative DNA helicase; chromosome replication; chain elongation Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 3513135 - 3514511 bp Length : 1377 bp Strand : + Note : - DNA sequence : ATGGGAATGACGCATGAACAATTGAAGGTCATCAGCGAAGAGGCACCCAGCTATGCGTATGCCGAAGTCGGGGTACTGGG TGGTCTGGTGCTGGAGAATGAGCGCTGGGATAGCGTTGTCCAGCTATTGGTTGCCGACGATTTTTATTTTCCGGCACACC GGATAATATTTCAGGCCATCGCTGAACTGAGCGAAAAAAACTGTCCGTTCGACCTGATCACCCTGACCGACAGGCTGACC CAGCGCGGGCACATCGACCGGGCGGGTGGGTTTGCCTATGTGGCGGAAGTGAGTAAGAACACACCGAGCGCGGCCAATAT TGAGGAATACGCCCGTATTGTGGCGGAAAAAAGCCGGTTACGTCAGTTAATGGCGCTGGGAAAATCCCTCAGCGCTGACG TTTTTCAGCCGAATATTCAGTCAGATACCCTGATAGAACAGGCAGAACGTCAGTTGTTTACTCTGGCTGAAAAAGGTTCG ACCCGCCAGCATCAGGAAATGACCCTGTTGCAGGGTGCAGACAGCCTGATTGCCCATCTGGAGCGAATACAAGGCTCACA GGGAATAACCGGCACACCGACCGGATTTCAGGATCTTGATGAAAAAACCTGCGGCTTGCAGGCCGGTGATCTCATTTTGC TGGCTGCCCGCCCTTCGATGGGAAAAACCGCACTGGGGCTGGCCTGTTGCCTGGGTGCCCTGCGACACCGGGATGATGCG GTGGTACAGATTTTCAGTCTGGAAATGCCGACAGCACAACTGATGCTGCGTCTCACCGCCATGGAAGGCGGGGTTTCTCT GAGCGCCCTGCGCAGCGGGATGCTGGATGATGAGCAGTGGGGGCGCATCAGCCAGAGCCTGGATCAGTTTGCCCGCTGGG ATCAGCGTCTGGTGATTGATGATTGCAGTCACCAGACGCCCGCACTATTACGTGCCCGTGCCCGCCGCTATACCCGCAAA TACGGTAAACCCGCCCTGATTATGGTTGACTACCTCCAGCTGATGTGTGCCCCCGGACAGGAAAACCGGACGCAGGAAAT TGCCGACATCTCCCGTAACCTGAAAGCGTTAGGCAAAGAACTGGGCTGCCCGGTACTGGCGCTGTCCCAGCTTAACCGTC AGGTCGAGAGCCGCGCCGATAAACGCCCCAATAACGGCGACCTGCGTGATTCCGGCTCACTGGAGCAGGACGCCGACCTG ATACTGCATCTCTATCGCGATGAAGTTTATCACCCGGACACCCCCGATACGGGTATCGCCGAAATCATTATTGGTAAGCC GCGTCAGGGCCCAACGGGCGTGGTTCGTGTGGGATTTGACGGCCAATATACGCGGTTTTCGGACTTATCCGCAGACAGTG ATGGTTACGGGGGGTAA Protein sequence : MGMTHEQLKVISEEAPSYAYAEVGVLGGLVLENERWDSVVQLLVADDFYFPAHRIIFQAIAELSEKNCPFDLITLTDRLT QRGHIDRAGGFAYVAEVSKNTPSAANIEEYARIVAEKSRLRQLMALGKSLSADVFQPNIQSDTLIEQAERQLFTLAEKGS TRQHQEMTLLQGADSLIAHLERIQGSQGITGTPTGFQDLDEKTCGLQAGDLILLAARPSMGKTALGLACCLGALRHRDDA VVQIFSLEMPTAQLMLRLTAMEGGVSLSALRSGMLDDEQWGRISQSLDQFARWDQRLVIDDCSHQTPALLRARARRYTRK YGKPALIMVDYLQLMCAPGQENRTQEIADISRNLKALGKELGCPVLALSQLNRQVESRADKRPNNGDLRDSGSLEQDADL ILHLYRDEVYHPDTPDTGIAEIIIGKPRQGPTGVVRVGFDGQYTRFSDLSADSDGYGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 8e-111 | 61 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-108 | 57 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 8e-108 | 57 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-110 | 56 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-105 | 54 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-105 | 54 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 8e-87 | 48 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-93 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-73 | 45 |
