Gene Information

Name : XNC1_3585 (XNC1_3585)
Accession : YP_003713723.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3466809 - 3467723 bp
Length : 915 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence :
ATGGCGCAGAAATCGACACGTTCTAAAATCGAACGGTTCAGAAAAGAATTTATGACCCATGCCCGGCAAGCGGGCGGGAG
TTTTGCGACGGTCGCTGACCGGGAGCGCATTGCCCGGCAGTTCCTCGACTATTTGAAAAACAACGGCATTAAATTCAGGC
AAATGGATAGCCTCAAGGCGAAATATATTGAGCGCTATATTGCTCAGCGTAAGACTGACCATATCAGTCACCGGACACTG
CAAAATGAAATGTCAGCACTGAGAGCGATTTTAGCGCAGGCCGGAAAGCTTAAGTTGGCTGCACCGGACAATCCGCGTCT
GAACAACCGGGCACTCGGTATTGCGGATATGAGCCGCAAGGGCACGAAGGCTGCGCTGACACCGACAGCATTCAGAGAAA
TTTTTCAGCAAGTCGAGCAAAAAGACCGGAGCGTGGCAGCCGTGATGCAACTGGCTTATGTGCTGGGGCTGCGGACCAAA
GAAGCGGTGGAAGCTTACAAATCCTTAGCTACCTGGAAAAAAGCGCTGGAGAATGGTCATACCTCCGTGCGGGTGGTGTT
TGGCACCAAAGGCGGACGGCCGAGGCAGACGGTCATTCTGGATCGGGAAGCGCTGCAATATGCTATTGCCTATGCCGAGT
GCGAACAGGCAGGGCGCAGCGGCAGATTAATTGATAAGCCCACGATCTATCAGGCGATAGATCGTTACCGTTACGTGGTC
AGACGTGCCGGACTGGTGGGTAAGCTAGCGCCGCACAGCATGCGCTACCATTTTGCCCAGCAATCCGGGGCATATTATAA
AGCACAGGGTTTTAGTGAGCGGGAAGCGCTGGCACTGGTATCAATGGATTTGGGGCATGGCGATGGGCGGGGACGTTATA
TCAGGCAGGCGTATTACCAGGGTATTGAGGGCTAA

Protein sequence :
MAQKSTRSKIERFRKEFMTHARQAGGSFATVADRERIARQFLDYLKNNGIKFRQMDSLKAKYIERYIAQRKTDHISHRTL
QNEMSALRAILAQAGKLKLAAPDNPRLNNRALGIADMSRKGTKAALTPTAFREIFQQVEQKDRSVAAVMQLAYVLGLRTK
EAVEAYKSLATWKKALENGHTSVRVVFGTKGGRPRQTVILDREALQYAIAYAECEQAGRSGRLIDKPTIYQAIDRYRYVV
RRAGLVGKLAPHSMRYHFAQQSGAYYKAQGFSEREALALVSMDLGHGDGRGRYIRQAYYQGIEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 1e-83 57
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 1e-83 57
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 2e-49 52
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 2e-49 52
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 1e-53 50
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 1e-53 50
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 4e-64 49
api85 CAF28559.1 putative integrase Not tested YAPI Protein 9e-48 49
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 9e-66 48
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 8e-55 48