Gene Information

Name : XNC1_3573 (XNC1_3573)
Accession : YP_003713713.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3454997 - 3455965 bp
Length : 969 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
ATGAAGACGTCACGCCTGGCTTTTCCGGTGGTTATCACGCTGGCCGCGGCGTTTACGCCTTTTTCTCAAGCCACCCTCAA
TACCGCCCAAATCGTAGCCAGCAGTATCTCACCCGCCTGCATTCAGTGGCGGGTCAGCGGCATTTGTTACTGGCTGTTTT
GTTCCTGGCACGGCTGCACGGTGAAAACCTCGGTCAAAGTGACTCATTTTCTGCCGCAGGCGGTGGTTTCCACCTATCAT
GCACCCGGTGGCAACCCGTGGTCTGAAATGGCTCACATCAGCCCGTTATCCGGCGGGCTGGAAACTGTGGTGACGAGGGC
GTTATCCGGCCTGACCACCGGCGGCGGTAATCACACGGTTCAGGTTGCCGGGAAGCGCAGTCCCCGTCTGCGTTTCAAAT
ACGCCGATGCTATCGGGCATCCCGCGACCACTCTGATTGGCGGACAAATCCCGGGCTATTCCTGCAAAAGTGTGGCCACA
CCGCTGATGCCCTATTTTCTCAGCACACTGGATACTGTCGCGTGGCGCAGCGGGCTGCCGGAGTCGCTTTATCCTGAAGC
GCTTATTCCCGGTCTGCGTGAGCTGGGAAGTACAATGGCAGGTAATATGTGGGGCAATCTCTACCCCCGTTCCGGTTTTG
TCACGCAGGTGGATGACGATAAAGCTGCTTCGGTGGTAGCGCAGCGGGTGGCGGACATTATCACCCGTACCGGGCAGCCC
CATGTTTATCAGCCACTGGCCGGGCAACGCCGTGACGGCTACTGGCCGCCGGTCCCGGTTACCGAAAATACCGGCACGAA
AAACCATCAATGGCAACGGTTGTCACCACAGTTAAGTCAGTCCTGTGCGGTGTTCCCGGATGGCCGCCACACAGCGGCGG
CAGACAGCCATCAGGCGTATGCCCTGTGGCAGCCCTACAGCTGTTGCCAGCGGCGCGGGCAACGTTTTCTCGGCAGTACG
GACCTATAA

Protein sequence :
MKTSRLAFPVVITLAAAFTPFSQATLNTAQIVASSISPACIQWRVSGICYWLFCSWHGCTVKTSVKVTHFLPQAVVSTYH
APGGNPWSEMAHISPLSGGLETVVTRALSGLTTGGGNHTVQVAGKRSPRLRFKYADAIGHPATTLIGGQIPGYSCKSVAT
PLMPYFLSTLDTVAWRSGLPESLYPEALIPGLRELGSTMAGNMWGNLYPRSGFVTQVDDDKAASVVAQRVADIITRTGQP
HVYQPLAGQRRDGYWPPVPVTENTGTKNHQWQRLSPQLSQSCAVFPDGRHTAAADSHQAYALWQPYSCCQRRGQRFLGST
DL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 3e-100 66
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 3e-100 66
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 2e-95 65
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 1e-79 65
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 1e-84 64
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 2e-90 62
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 3e-90 62
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 3e-69 52
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 3e-70 51
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-70 50
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-67 49
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-70 49
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 7e-69 49
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-61 46