Gene Information

Name : XNC1_3561 (XNC1_3561)
Accession : YP_003713701.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3431736 - 3432137 bp
Length : 402 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
ATGCGGAAAATAAAATATTATTGGCTGTTGGGGTTGGCAGGGCTATTAGTCGGATGTACCACTTCGAAAGACGCCTTACT
CCCTGCCGGAAAGCAGACAGTACTGGCAATGTGGCAGGGGAATAAGGCAGGTCATGCCACCGAATCGGCAAGGGAAACAC
TGCGCCGTTCTTTAACTGTATCTGAACGGCTCAGGGCTCTGGAAGAACCTTATCATTACAGCCGTTCAGCCGCGCAGGAA
ATCAGCCAGCAGTTTCCCCGCTTACCGAATCCCGATATGGTGATGTATATCTTCCCACATCTGGTTGCCGGCAATACGCC
GATACCGGGCTACAGCACGGTATTTCCGTTTTACAGCCAAGTACAGTATGCCCTGCCGGGTGAACGCACGGAGGCACTGT
AA

Protein sequence :
MRKIKYYWLLGLAGLLVGCTTSKDALLPAGKQTVLAMWQGNKAGHATESARETLRRSLTVSERLRALEEPYHYSRSAAQE
ISQQFPRLPNPDMVMYIFPHLVAGNTPIPGYSTVFPFYSQVQYALPGERTEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 4e-34 64
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 4e-34 64
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 3e-32 59
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 5e-28 57
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 2e-28 56
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 2e-27 52
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-25 49
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-26 48
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 5e-27 47
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 4e-23 46
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-26 46
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-23 44
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 5e-21 43