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Name : XNC1_3548 (XNC1_3548) Accession : YP_003713689.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Unknown Product : plasmid transfer protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 3422946 - 3425120 bp Length : 2175 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 15263089 DNA sequence : ATGAGCCGCCGTTATGTGGTTGAAGCCCTGCTGCGCCCGGCCGTTGAGCTGAATACAGCGCTGGTCTCCGCCGTGGCGGC GTTTGTCTGTATCCGGGCACCCTGGGCCATCGCACTGGCACCTTCCGTCAGCTATGTCATAGCAGGCGGTTTTGCTGCAC TGGCGATGATACGCACATGGCAGGGGATTCAGGTCATCCGTTATCGCAGAAACCTGCGCCGCCTGCCACGTTACCAGATG AGCACCAGGCAAATTCCTGTCAGTCACCGGCAGTTGTTTCTGGGCAGGGGCTTTCGCTGGCAACAGAAGCATACCCAGCG TTTGCTGGATACGCGACGACCGGAAGTGGAACGATTTGTGCAACCCTCCCATATCTATCAGTTTGCCCGCGCACTGGAGC GCCGAACTGAATACCGTTGGCCGACATTATCTGCCCTGCTGCGTAAAGACTCACCATTTAATCCGGTACGTCCGTTGCCA CCGGTGGGGGGCAATCCTGCTATCCACGGTATTGAGCCACAGGAAGCCGATGTTTTTATGGATCTGCGCGAGCGGGTCGG GCACACGTTGGTGATGGGGACAACCCGTGTAGGAAAAACTAGGCTGGCCGAATTGCTGATAACGCAGGATATCCGACGTG GCGAGGTGGTGATTGTGTTTGATCCCAAAGGGGATGCTGACCTGTTAAGGCGTATCTGGGCAGAAGCGCACCGGGTCGGT CGAGGCAATGAACTGTCCCTCTTTCATCTGGGCTGGCCGGAGATTTCAGCCCGCTATAACGCCGTCGGGCGGTTTGGCCG GGTTTCTGAAGTGGCGTCCCGTCTGGCCGGTCAGCTCAGCGGCGAAGGCAACAGCGCCGCGTTCCGTGAATTTGCCTGGC GGTTTGTCAATATTGTCGCCCGGGCTTTGGTGGCTCTGGGGCACCGGCCGGATTACCAGCTTATCACCCGCTACGTCAAT AATATCAGCGAACTGTATCAGTTATATGCCAGCAAAGTGATGGAAGAAAGAATGCCGGTATTGTTAGCGCAAATCAGTCA TTGCCTCGGTACACTGAAAGAAAAAGACATTCCACGCAATATGCAGGGGCAGCCCGATGCTCTGCGGCTCTGGGCAACGG AAATCACCCTGAGCTCTGACGCAGGCAAGCAACTCTATGACCCGATTCTGGATGGTCTGCGTTCTGCCGTGCGTTATGAC CGCACCTATTTTGATAAAATTGTCGCGTCCTTGCTGCCGCTGCTGGAAAAACTGACCACAGGCAAAATTGCGGAATTATT GTCACCGGATTATCTCAATATGCGTGACCTGCGGCCCATCTTTGACTGGGAGCAGGTGATCCGCAAAAACGGCATTGTTT ATATCGGGCTGGATGCGCTGTCTGACAGCGATGTGGCCTCGGCGGTGGGCAACAGTATGTTTGCGGATTTGGTGAGTGTC GCCGGACAGATTTATAAATATGGCATGAATGCCGGCTTGCCGGTTCGTCATGATGGTAAGCTGGCGATTAATCTGCATTG TGATGAATTCAACGAATTGATGGGTGATGAGTTTATCCCGCTGATCAATAAAGGCGGCGGGGCAGGGATGCAGGTGACGG CGTATACCCAGACCTCCTCCGATATCGAAGCCCGTATTGGCAGCCCGGCCAAAACCGCGCAGGTGGTGGGCAACTTCAAT ACCCTGATGATGCTGCGGGTGCGGGATAACCGGACGGCTGAACTGCTCACCAGCCAGCTGCCGGAAGTGGAAATCTACAG TAAGACCCTGGTATCGGGGCATTCAGATATTGCCGATGTGGAACAGGGGCAGGATTTTACTTCTTCCACACAGGACAGGG TAGGCACCGTCAAAACGCCGCTTGTCACGCCCGCTGAAATGATTAACCTGCCGAAAGGGCAGGCGTTCGCGCTGCTGGAA GGCGGGCAACTGTGGAAAATTCGCATGCCTTTGCCCACGGGGGATGACGATGATGCCCTGATGCCGGCCAGTTTGCAGAA CAGATGCGCCGGCACTACCGCACCAGTGAAAACTGGTGGGAAGAAAAGGGGTAGTTTCCGGTCATGGCACAGTCAGAAAA CCAGTCCCGCCCATCTTCCCAACCGCCCCGCAAGCATGGCCTGCTTTATCGTCTGTTATGGGAATGGCCGTGGCAACTCA TTGGGTTTATGGTGA Protein sequence : MSRRYVVEALLRPAVELNTALVSAVAAFVCIRAPWAIALAPSVSYVIAGGFAALAMIRTWQGIQVIRYRRNLRRLPRYQM STRQIPVSHRQLFLGRGFRWQQKHTQRLLDTRRPEVERFVQPSHIYQFARALERRTEYRWPTLSALLRKDSPFNPVRPLP PVGGNPAIHGIEPQEADVFMDLRERVGHTLVMGTTRVGKTRLAELLITQDIRRGEVVIVFDPKGDADLLRRIWAEAHRVG RGNELSLFHLGWPEISARYNAVGRFGRVSEVASRLAGQLSGEGNSAAFREFAWRFVNIVARALVALGHRPDYQLITRYVN NISELYQLYASKVMEERMPVLLAQISHCLGTLKEKDIPRNMQGQPDALRLWATEITLSSDAGKQLYDPILDGLRSAVRYD RTYFDKIVASLLPLLEKLTTGKIAELLSPDYLNMRDLRPIFDWEQVIRKNGIVYIGLDALSDSDVASAVGNSMFADLVSV AGQIYKYGMNAGLPVRHDGKLAINLHCDEFNELMGDEFIPLINKGGGAGMQVTAYTQTSSDIEARIGSPAKTAQVVGNFN TLMMLRVRDNRTAELLTSQLPEVEIYSKTLVSGHSDIADVEQGQDFTSSTQDRVGTVKTPLVTPAEMINLPKGQAFALLE GGQLWKIRMPLPTGDDDDALMPASLQNRCAGTTAPVKTGGKKRGSFRSWHSQKTSPAHLPNRPASMACFIVCYGNGRGNS LGLW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2588 | YP_002152307.1 | plasmid transfer protein | Not tested | Not named | Protein | 0.0 | 73 |
| api27 | CAF28501.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 70 |
| YE3493 | YP_001007651.1 | TraG-family protein | Not tested | YAPI | Protein | 0.0 | 70 |
| YpsIP31758_3718 | YP_001402672.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 70 |
| STY4562 | NP_458648.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 68 |
| t4260 | NP_807858.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 68 |
| ORF C65 | AAN62159.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 63 |
| traG | CAI36113.1 | putative TraG family conjugative protein | Not tested | PPHGI-1 | Protein | 0.0 | 62 |
| ORF SG68 | AAN62290.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 62 |
| EXA47 | ABD94656.1 | TraG/TraD family protein | Not tested | ExoU island A | Protein | 1e-173 | 59 |
| unnamed | ABR13375.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 2e-174 | 59 |
| RL047 | AAP84173.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 3e-173 | 59 |
| Pmu_03190 | YP_005176218.1 | conjugal transfer protein TraD | Not tested | ICEPmu1 | Protein | 4e-174 | 59 |
| traD | AAW83057.1 | TraD | Not tested | GGI | Protein | 4e-133 | 49 |
