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Name : XNC1_3538 (XNC1_3538) Accession : YP_003713679.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 3414800 - 3416794 bp Length : 1995 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 11395412; Product type e : enzyme DNA sequence : ATGCCACTTTATTTATGTGAAAAACCCTCTCAGGCCAGAGATATCGCCCGGGTACTGGGCGTGAAGCAGCGTGGACAGGG CTATCTCTTTGGCGGCAGTATTACTGTCACCTGGGCTATCGGGCATTTGCTGGAAATGGCTGCACCCGAACACTATGGCG AACAATTCGGCCCGCCGTGGCGCATGGAACCCCTGCCGGTGCTGCCTGCACAGTGGCAATGGACGGTGAAGAAAGAGACC GCCGATCAGTTTGCGGTGATCAGACAATTACTGAAACAGGCTGACGAAGTGATTATCGCCACCGATGCTGACCGTGAAGG GGAAGTGATTGCCCGGGAACTGCTGGAGTATTGCCGTTTCACCGGTCCCGTCAGACGGCTGTGGCTGTCTGCGCTGGATG AAACCAGTATCCGGCAGGCACTGGCCGCGATATTACCGGGGGAGCAAACCGAGTCGCTCTGGCAGGCCGGACTGGGGCGG GCACGGGCGGACTGGCTGACGGGAATAAACCTGACCCGTCTGTACACCCTGAAAGCGCAGGAGCAGGGATTTGGTGAAGT GTTGTCCATCGGGCGGGTACAAACGCCGACACTGGCACTGGTCGTGAACCGCGACAACGATATTGCCCGGTTTGAGCAAA AACCCTACTGGCAGGTGATGGCCACATTGCAAAAAGATGACATTAGCTTTCGGGCTAAATGGCTGCCTGCGCCCGACGAT GGCGATGAAGAAAAACGCTGCATCCGGGAGGATATCGCGCAGCGTGTGGTTCAGCGTTGTCAGCAGGCACAAGATGCTGT GGTGACTGAACTCACGCAGAAACGGGAGAAAACCCCGCCGCCGCTCTGTTTTGATTTGGGCACACTTCAGCAGGTGGCTT CCCGTCAGTGGGGAATGGGGGCCGGTCAGGTACTGACGATTGCCCAGTCGTTGTATGAAACCCATAAAGCGACCACCTAC CCGCGCACGGATTGCGGTTATCTGCCGGTTTCGATGCGGGAGAACATTCCGGCCGTGTTCACCGCGCTGACCCGCACCGA CCCCGCGATGAGTGCCATTATCAGCCAGCTGGATGCCAGCGCTTTTTCCCGTGTCTGGAATGACAGCCAGATCACGGCAC ACCCTGCCATTATTCCGACCCGCCACACTTTTGATATGACGAAACTGACCGCGGATGAATTAAAGGTCTATCAGTTGATC CGCCACTATTATCTGGCGCAGTTTCTGCCTGCTCAGGAAACGGATGTGACTGATGTGACATTCACTATCGGCGGGCAGGT ATTTCAGGCGAAAGGGCGGGTCAGTGTGGTCACGGGCTGGAAGGCACTGTTTGCCGATGAAAAACAGGCGCAGGAGCAGG AAGACAATACCGCGCTGCCTGCACTGAAAAAAGAGGAAATCAGCCCGGTACTCCGTGCAGAAATACAGCCCCGGCAAACC CGGCCGCCTGCGCCTTTTACCGAAGGTACGCTGATTGCCGCCATGAAAAATGCGGCGGCGTTTATCCATGATCCACAGCT TAAAAAAGTGCTGCGGGAAAGTGCCGGTCTGGGCACGGAGGCCACCCGGGCCGGTATCATTGAAGCCCTGTTTAAACGCC GGTTACTGGCGCGAAAAAAGAAAAACCTGCATGCAACGCAGCTGGCGCAGGAGCTGATAGCCGGGCTGCCGGATGTCCTG ACCCATCCGGGCATGACGGCACTCTGGGAACAGTCACTGGACGACATTGCCCGGGGCCGGACCACACTGGATGGCTTTAT GCAGAAACAGGCACAGTGGCTGGCGCATTTAGTGGAAAAGGGCAAAACACAGCCGATCCGGTTTACCCTGCCGAAAACCC CGGCGTGCCCGCGCTGTGGCGGCCCGATGCAAAAACGGGCGGGAAAAACAACCCCGTTCTGGGGCTGCACCCGCTATCCG GCATGCAAAGGGATGCTGAACGCTAACGCGGTGATCGGCTCCCGAAAAACCCGGCGGGGAAATTCGCCGGACTGA Protein sequence : MPLYLCEKPSQARDIARVLGVKQRGQGYLFGGSITVTWAIGHLLEMAAPEHYGEQFGPPWRMEPLPVLPAQWQWTVKKET ADQFAVIRQLLKQADEVIIATDADREGEVIARELLEYCRFTGPVRRLWLSALDETSIRQALAAILPGEQTESLWQAGLGR ARADWLTGINLTRLYTLKAQEQGFGEVLSIGRVQTPTLALVVNRDNDIARFEQKPYWQVMATLQKDDISFRAKWLPAPDD GDEEKRCIREDIAQRVVQRCQQAQDAVVTELTQKREKTPPPLCFDLGTLQQVASRQWGMGAGQVLTIAQSLYETHKATTY PRTDCGYLPVSMRENIPAVFTALTRTDPAMSAIISQLDASAFSRVWNDSQITAHPAIIPTRHTFDMTKLTADELKVYQLI RHYYLAQFLPAQETDVTDVTFTIGGQVFQAKGRVSVVTGWKALFADEKQAQEQEDNTALPALKKEEISPVLRAEIQPRQT RPPAPFTEGTLIAAMKNAAAFIHDPQLKKVLRESAGLGTEATRAGIIEALFKRRLLARKKKNLHATQLAQELIAGLPDVL THPGMTALWEQSLDDIARGRTTLDGFMQKQAQWLAHLVEKGKTQPIRFTLPKTPACPRCGGPMQKRAGKTTPFWGCTRYP ACKGMLNANAVIGSRKTRRGNSPD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 58 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 58 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 0.0 | 58 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 2e-179 | 58 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 1e-152 | 48 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 8e-148 | 48 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 1e-138 | 48 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 9e-155 | 47 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 4e-119 | 41 |
