Gene Information

Name : XNC1_3474 (XNC1_3474)
Accession : YP_003713628.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3368038 - 3369432 bp
Length : 1395 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pm : membrane component

DNA sequence :
ATGACGACGAACAGTTATCTGGAATATTTTCTGACCCTGCTTGGCTGGGTGGTGAATAATGGCCTGTGGCAGGTATTGAT
TGCCACCGGGCTGTTTACCGTGCCGTTGTTGTTCAAAATCATGGCCCTGTGGCTGAAAATCCGTGAAGACAGTGTGGAAG
AGGGCAATGCAGGACTCCGGTCGCTCTCCCGTCTCGAAAATACCCTGTACGGGGCGTTCTTTGTCATGATCGCCTGTTGC
GTCCCACTGGTTCAGGTCAGCCTCAATACCCTGCAATATGATCCGTCCCGGGCCAAGACCTGCGGCACCTGGACGCCGAA
ATCACCGCAGGAAACGGGGTATGCGCCGGTGATTTCCAGTCTGGGCGAACACATGGCCGCCGTGCCGGTCTGGTGGGCGG
TGGTGCACCGGTTATCAAAAGGACTGACGCAGGCGGCGATCGCGTCAGTGCCCTGCCGCCCGGATCTGCGGCAACTGCGT
TTTGAGGTGCAGCATACCCGTATTGCCAACGCCGCCCTGGCAGCAGAATTGCAGGATTTTACCCACGATTGCTATGCCCT
GGCGCTTTATCAGTGGAAACAACGCGATCAGGGACAAACCGGTGATCCCGCGGTGCTGAAGGATATCGACTGGCCGGGGA
GTCAGACGTTTTTGTCGGGGGATTACACTACGCTGCAATCACGCACACCCCGGGCACATTTCCCGTGGATGGCGAGCCGG
GACAGCGGCCGGCCGAATACCGGGCGGGGCGGCTATCCGACCTGTAAAGTCTGGTGGTCAGCCCCGCAAACCGGACTGGA
AGCCCGGGTACTGGCACAGGCCGATCCGGGGCTGTGGCTGCGTTTGTCTGCGGCACTGAAAATACTGGGCAAGGGAAGCC
GTGAATATAAAGCGGCGGTGATCCGTCGTCTGGTCAGTCCGGTCAACCTGACGGTATCGCAGGAGGGGTATGTCTATGCC
GGTTATGGCGGTAATGCCGATTTTACCGTCTGGAACGGCTCTAACCGGGCCGGGGCCTCTGCGGGGGTGATGTTGGGTGG
CCTGCTCGCGTACCCGATGCTGGATGCCGTGCGGCAGGCGCTGCCGATGATGCAGGCCGTTCTCCTGATGGCCCTGTATA
TCCTGCTGCCGTTGATCCTGCTGTTGGCCGCCTATGAATTTAAGACCGTCCTGACGCTGACGTTTGTGATTTTTGCCCTG
AATTTTCTCACCTTCTGGTGGGAGCTGGCCCGCTGGCTGGACAGCTTTCTGCTGGATGCGCTGTACGGTTCAGACACCCA
CAGCCTGTTTAATCTGGCCGGGTTGCAGAACACCTCGGATGATTTAATCATGGCGCTGGTGATGGGGATGCTGTTTATTG
TCCTGCCGATGGCCTGGCTGGGTGCACTGGCCTAG

Protein sequence :
MTTNSYLEYFLTLLGWVVNNGLWQVLIATGLFTVPLLFKIMALWLKIREDSVEEGNAGLRSLSRLENTLYGAFFVMIACC
VPLVQVSLNTLQYDPSRAKTCGTWTPKSPQETGYAPVISSLGEHMAAVPVWWAVVHRLSKGLTQAAIASVPCRPDLRQLR
FEVQHTRIANAALAAELQDFTHDCYALALYQWKQRDQGQTGDPAVLKDIDWPGSQTFLSGDYTTLQSRTPRAHFPWMASR
DSGRPNTGRGGYPTCKVWWSAPQTGLEARVLAQADPGLWLRLSAALKILGKGSREYKAAVIRRLVSPVNLTVSQEGYVYA
GYGGNADFTVWNGSNRAGASAGVMLGGLLAYPMLDAVRQALPMMQAVLLMALYILLPLILLLAAYEFKTVLTLTFVIFAL
NFLTFWWELARWLDSFLLDALYGSDTHSLFNLAGLQNTSDDLIMALVMGMLFIVLPMAWLGALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 7e-132 61
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 1e-129 60
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 1e-129 60
ORF SG48 AAN62270.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-80 44
EXA17 ABD94626.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-82 44
YE3465 YP_001007626.1 hypothetical protein Not tested YAPI Protein 4e-89 44
YpsIP31758_3699 YP_001402653.1 hypothetical protein Not tested YAPI Protein 2e-89 44
api56 CAF28530.1 putative membrane protein Not tested YAPI Protein 5e-90 44
pph92 CAI36133.1 hypothetical protein Not tested PPHGI-1 Protein 8e-80 43
RL014 AAP84141.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-82 43
unnamed ABR13354.1 hypothetical protein Not tested PAGI-5 Protein 5e-83 43
Pmu_03040 YP_005176203.1 TraG-like domain-containing protein Not tested ICEPmu1 Protein 7e-89 42
ORF C40 AAN62133.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-80 42