Gene Information

Name : XNC1_3472 (XNC1_3472)
Accession : YP_003713626.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3366254 - 3367693 bp
Length : 1440 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
ATGATAAGAAAACCGGGACTGCTGATGGTGGGCGGGCTGGCACTCGTTACCGCTCAGGTTCAGGCATCAGAACGGTCGGT
TTCCTTACCGGCCGTCAGTCACAGTGCACTGGGCTATGGTGCACAGAGCAGCGGGGCAGTCTCCGATACGCTGTTCTATA
CCCTCGGTGGCGGCTCGGTGATTTCTGAGCCGGCCAGCCGTGGAGGTTCAACCAGGCTGGCCGGGCTGGAGCTGGGCTGG
AGTTCGGATTTGATGTGCGGCAATTTTGACCTGAAAACCACGGTCAGTAATCAGCTCAACGGTATCACGGCGGGCATGAA
AAACCTGATGAGTGAAGTCATTCAGGGCGCCACCGGGGCGGTCGCCAGTCTCCCCGCCATGATAATCCAGCGGGCCAATC
CGGGGCTGTATGACATGCTGACCAACGGGGTATTGCAGGCCAATGTGGCGTTCGACAAGGCCCAGTTCAATTGCCAGAAC
ATGGCCAGACGGATGGTGGATTTTGCGCAAAACAACAAATGGACGCAGTCTGCGGCGATGCAGGAATACAAGACACAGGT
TAACAGCGGGGATGCTGACGCGGTGAGGGTCAATAATGCCGGCACCAGAGCCACCGGGACAGGCGGGCATCCGTGGATTG
GCGGCCGGAAGCAGGGCGGAAAAGGGCAGAGCGCCATTCGTCCGACCCGTGATTTAGCCAGTGCCGGGTTTAATATGATG
AACCATCAGCCGGTACTGAGCACCGCCGCCATCCGGCATCAGGATTGCAGCGGCAGCAGCTGCACCAAATTCAGCAGTGC
GCGTGAGGCGGCAGAAGCGGTCGTCAACGTGCTGGGTGACCGTGCAATCCGTACTTGTGCCAACGCGGCGGAGTGCATCA
GCGGCGGGGAGGCGCACCAGCCGGGCACCACCGTTGCCGGCACGGGCTTTGCACCGATGCTGGAAGCACAGACTCAGGCC
AATATGGAACAGCTGGTGAAGCTGGTTAACGGGACGGAAAAACCGACGGCGGCGAACCTGGCCAGACTGAAAACCGGCAG
CCTGACGGTCACCCGGGGCGTGATCCAGGCATTGCAACGTGATCCGGACAATGCCGCGCTGACGGCACGTCTGGCGGGTG
AACTGGCGATGGCAGAGACCACGGAGACGGCATTGCTGATGCGGCGGATGCTGATTACCGGCATGTCCGAACCCAATGCC
GCCGCGCAGGCCGAAGCCCTCAATGAGGGCGAACGGCGGATTGCGGCGCTGGACAGGGAAATCAATGCCCTGAAAAATGA
AATGACATTGAAACGCGAACTGGCGCGCAACGCCATCCTGACCATTATCGAGCGGGAAAACCACCGGATTGAAGCGCATC
CGCAGAAACACGTGACGGAAAGCAGTGATAAGCGTTTCTATCAACTGGAAAATCCGGCAAACCGGACGACGGGAAGGTAA

Protein sequence :
MIRKPGLLMVGGLALVTAQVQASERSVSLPAVSHSALGYGAQSSGAVSDTLFYTLGGGSVISEPASRGGSTRLAGLELGW
SSDLMCGNFDLKTTVSNQLNGITAGMKNLMSEVIQGATGAVASLPAMIIQRANPGLYDMLTNGVLQANVAFDKAQFNCQN
MARRMVDFAQNNKWTQSAAMQEYKTQVNSGDADAVRVNNAGTRATGTGGHPWIGGRKQGGKGQSAIRPTRDLASAGFNMM
NHQPVLSTAAIRHQDCSGSSCTKFSSAREAAEAVVNVLGDRAIRTCANAAECISGGEAHQPGTTVAGTGFAPMLEAQTQA
NMEQLVKLVNGTEKPTAANLARLKTGSLTVTRGVIQALQRDPDNAALTARLAGELAMAETTETALLMRRMLITGMSEPNA
AAQAEALNEGERRIAALDREINALKNEMTLKRELARNAILTIIERENHRIEAHPQKHVTESSDKRFYQLENPANRTTGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 4e-126 60
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 4e-126 60
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 2e-124 60
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 2e-123 58
PMI2572 YP_002152291.1 hypothetical protein Not tested Not named Protein 8e-128 58
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 2e-124 57
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 3e-124 57
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-71 41