Gene Information

Name : XNC1_3471 (XNC1_3471)
Accession : YP_003713625.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3365331 - 3366257 bp
Length : 927 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
ATGAAGACGTCACGCCTGGCTTTTCCGGTGGTTATCACGCTGGTTGCGGCATTTGCGCCTTTTTCTCAAGCCACCCTCAA
TACTGCCCAAATCGTGGCCGGCAGTGTCTCGCCCGCCTGTATTCAGTGGCGGGTCAGCGGTATTTGTTACTGGCTGTTTT
GTTCCTGGCATGGCTGCACGGTAAAAACCTCGGTCAAAGTGACCCATTTCCTGCCGCAGGCGGTGGTCTCCACCTATCAT
GCACCCGGTGGCAACCCGTGGTCTGAAATGGCGCAAATCAGCCCCTTATCCGGCGGGCTGGAAAATGCGTTATCCGGCCT
GACCACCGGTGGGGGTAATCACACGGTTCAGGTTGCCGGGAAGCAGAGTACCCATCTGCGTTTCAAATACGCCGATGCCA
TCGGGCATCCCGCGACCACTCTGATTGGCGGACAAATCCCGGGGTATTCCTGTCGCAGTGCGGCCACACCGCTGATGCCC
TATTTTCTCAGCACACTGGATACTGTCGCGTGGCGCAGCGGGCTGCCGGAGTCGCTTTATCCTGAAGCGCTTGTTCCCGG
TCTGCGTGAACTGGGAAGTACAATGGCAGGTAATATGTGGGGCAATCTCTACCCCCGTTCCGGTTTTGTCACGCAGGTGG
ATGACGATAAAGCTGCTTCGGTGGTAGCGCAGCGGGTGGCGGACATTATCACCCGTACCGGGCAGCCCCATGTTTATCAG
CCACTGGCCGGGCAACGGCGTGACGGCTATTGGCCGCCGTCCCCGGTCACCGAAAATACCGGCACGAAAAATCACCAATG
GCAACGGTTGTCACCACAGTTAAGTCAGTCCTGTGCGGTGTTCCCGGATGGCCGCCACACAGCTGTTGCCAGCGGCGCGG
GCAACGTTTTCTCGGCAGTACGGACCTATAAGGAAAAAACAGGATGA

Protein sequence :
MKTSRLAFPVVITLVAAFAPFSQATLNTAQIVAGSVSPACIQWRVSGICYWLFCSWHGCTVKTSVKVTHFLPQAVVSTYH
APGGNPWSEMAQISPLSGGLENALSGLTTGGGNHTVQVAGKQSTHLRFKYADAIGHPATTLIGGQIPGYSCRSAATPLMP
YFLSTLDTVAWRSGLPESLYPEALVPGLRELGSTMAGNMWGNLYPRSGFVTQVDDDKAASVVAQRVADIITRTGQPHVYQ
PLAGQRRDGYWPPSPVTENTGTKNHQWQRLSPQLSQSCAVFPDGRHTAVASGAGNVFSAVRTYKEKTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 2e-90 66
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 2e-90 66
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 4e-85 65
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 4e-79 63
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 1e-78 63
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 5e-84 62
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 4e-84 62
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 7e-62 50
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 7e-62 50
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 1e-62 49
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 9e-61 48
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-62 47
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-55 46
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-61 45