Gene Information

Name : XNC1_3469 (XNC1_3469)
Accession : YP_003713623.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : Rhs family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3501
EC number : -
Position : 3362421 - 3364532 bp
Length : 2112 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
ATGTCAATAAAGAAACACCTGACGAAGTTACAGCAGGGACAATCCCTGCTGGAAAAAGGAAAGCAGGCAACAGGTCTGGC
GAAACAGGCAGCAGGCCTGCCGGGTGGTGCCGGTACCGCTGGCCTGACGGATAAAAGTGGCCTGATGAAACCCGGCGGTT
TTGCCGGCCCGCTCAGCGGCGGTCAGAGTCTGGTGCAGCAAGCGACGGCCGGACACAGCGGCGCAGCCAGGGCGCTGCAA
CAGGCGGGGGTCGGTGGAGACTCAGCACCGGGCGGCCTGCGATTTACCCTGACGGCAGGCAGCCTGCCGCCACAGACGTT
CGTTGTCACCGATTTTACGCTGAACGAAGGGTTCTCCCGGCTCTTTACCCTCAACGTGGGGCTGGCAAGCGCTGATCCGG
CAATTGACTTCCCGTCTGTCCTCGATCGCAGTGCGACGCTCACCATTACGCAGGACGGCAAAGAACAGCGCAGTCTCAGT
GGCTGCGTCGCCCGCTTTGAACAGGGCAACACCGGGCTGCACCAGACCACCTACCAGATGACGATTTGCCCGGATTTATG
GCGCACTTCCCTGCGGCAGAACTCACGCATCTTCCAGCAGCAGGATATCGTGACCATTCTCACCACCCTGCTTAAAGAGC
ACGGCATTCGTGATGTGGTCTTCAGCCTGCGCCAGCCGCACCCGGCACGGGAATTCTGTGTCCAGTATCAGGAAAGCGAC
TTTGACTTCCTGCAACGGCTGACGGCGGAAGAAGGCATCTTCTACTTCTTTGAATGCGGCAACGGGCGCAACACGCTGGT
GTTCGCCGACGACGCCGGTTCAGTGCCGCCGGGCATTATGCTGCCTTATCAGCCGGGTGACATCAGTACCACCGGCGAGC
CGTCGGTGACCAGCTTCACCAGCAGTGCGCAGGTACGCCCGGCCAGGGTTGAGCTGAAGGACTACACCTTCAAAAATCCG
GCCTGGCCGGCCGAATTTCGTGAACAGATGAAGGACGAACAGCTACAGGAGCAGTATTACGAGCACTATGACTACCCCGG
CCGGTTCAAGGACGAAGCCCATGGCAAAGCTTTCACCCGTTACCGGCTGGAAGCGTTGCGTAACGATGCGATCACCGGAC
AAGGGCACGGTCACGCGATTGCCATCCAGCCGGGGAAACTGTTCATTCTGACCAACCACCCGCGTGACGACCTGAATCAG
CCGTGGCAGGTGGTGAGCGCGAGTCACACTGGCAACCAGCCGGGCGCCCTGGAAACGGCCACCGGTGACAGCGGCACCAC
GTTGCACAGCCAGTTCAGCTTCATCCGCCATAACCAGCACTGGCGGCCGACGCCGCTGCCGAAACCGGGTATTGACGGCC
CACAGATTGCCAAAGTGGTGGGCCCGGCCGGGGAAGAAATCTTCTGTGACCAGTACGGGCGTATCCGCCTCCAGTTCCCG
TGGGATCGCTACGGCAAATCTGATGACCAGAGTTCCTGCTGGATCCGGGTGACCCAGCCGTGGGCGGGACAGGGCTGGGG
CATGCTCGCTATCCCACGTATCGGTCAGGAAGTGGTGGTGGATTTTCTGCATGGCGACCCGGATCAACCTATTGTCACCG
GCAGAACCTACCATGCGAGTAACATCCCGCCGGGCGGGCTGCCGGGCAGCAAAACCCAGATGGCCTTCCGCTCAAAAACC
CACAAAGGCGAGGGATATAACGAGCTGCTGTTTGAGGATGCCAAAGGCAGTGAACGGCTTGCTCTGCATGCACAGAAGGA
TATGCACACCACGGTAAAAAATGACCAGAGTCTGGTCGTGGAGGCTGGTAACCGCAGCCTGCTCATCCAGACGGGAGATG
AGAACAAGACCGTAGAACAGGGCAACCTGACAGAAAATGTCTGCCAAAAACGCAGTACGGAAGCCAATGTGGTGCAGGTG
AAAACGATGGCGGGTAAAGCCGGCGCGGGGACACAGTTGTATGAAGCGGAAGACGATATCACGTTGAAAGTGGGCAGCGG
CACCCTCCAAATGACGAAAACAAACATCAAAATTTCCTTTGGGGGCGCCAGTATTGAGCTAAACGACAGCGGGGTCACCG
TATTAGGTGGTCAGATTAACATCAACAAATAA

Protein sequence :
MSIKKHLTKLQQGQSLLEKGKQATGLAKQAAGLPGGAGTAGLTDKSGLMKPGGFAGPLSGGQSLVQQATAGHSGAARALQ
QAGVGGDSAPGGLRFTLTAGSLPPQTFVVTDFTLNEGFSRLFTLNVGLASADPAIDFPSVLDRSATLTITQDGKEQRSLS
GCVARFEQGNTGLHQTTYQMTICPDLWRTSLRQNSRIFQQQDIVTILTTLLKEHGIRDVVFSLRQPHPAREFCVQYQESD
FDFLQRLTAEEGIFYFFECGNGRNTLVFADDAGSVPPGIMLPYQPGDISTTGEPSVTSFTSSAQVRPARVELKDYTFKNP
AWPAEFREQMKDEQLQEQYYEHYDYPGRFKDEAHGKAFTRYRLEALRNDAITGQGHGHAIAIQPGKLFILTNHPRDDLNQ
PWQVVSASHTGNQPGALETATGDSGTTLHSQFSFIRHNQHWRPTPLPKPGIDGPQIAKVVGPAGEEIFCDQYGRIRLQFP
WDRYGKSDDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYHASNIPPGGLPGSKTQMAFRSKT
HKGEGYNELLFEDAKGSERLALHAQKDMHTTVKNDQSLVVEAGNRSLLIQTGDENKTVEQGNLTENVCQKRSTEANVVQV
KTMAGKAGAGTQLYEAEDDITLKVGSGTLQMTKTNIKISFGGASIELNDSGVTVLGGQININK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 0.0 62
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-120 45
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 2e-120 45