Gene Information

Name : XNC1_3404 (XNC1_3404)
Accession : YP_003713565.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : DNA-binding prophage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3315760 - 3316413 bp
Length : 654 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin

DNA sequence : 
ATGTCTGCGCTGCGTAATATCTTCCGCATGGCAGGCAGGGAGAAGCTGGAAACTTCTCCGCGTTTGAGTAATCAGGCATT
GGGTTTAAGCGGAGCCAGTCGTGCGGGAACAAAGCAGGCGATCCCTGATGCCATGTTTCAGGTTGTATATCAGAAGGCAC
TTGAACGGGATGCCGGATTTGCAGCCACACTGAAACTTGCCCGTTTGATGGGGTTACGTTCTCAGGAAGCGGTACAGTGT
AGTGCTTCGTTGAAAAGTTGGCGAAAACAGTTAGAACAACCAGAGCCAAAATTGCATGTTGTTTTCGGCACAAAAGGCGG
CCGACCAAGGCAAACCCGTGTATTGGATGTTGCGGCGGTGAAAGAGGCTGTAGAACAGGCCATTGCTGTTGCGGAGCAAC
GTGGCGGCAAGTTGATTGATAAACTGGATCTCAAACAGGCCATGAACTACTGGCGGACACACACCACAAGGATTGGTTTA
AAAGGTTGTCATTCTCCCCACAGTTTGCGCTATGCGTGGGCGCAGGATGCACTGGCCTTTTACCAACAAAATGGCTTTAG
TCGTCAGGAGACAAGGGCATTGGTTTCAATGGATTTGGGGCATGGTGACGGACGCGGACGTTATGTTGAGCGGGTTTATA
GTCGTTCAACTTAG

Protein sequence : 
MSALRNIFRMAGREKLETSPRLSNQALGLSGASRAGTKQAIPDAMFQVVYQKALERDAGFAATLKLARLMGLRSQEAVQC
SASLKSWRKQLEQPEPKLHVVFGTKGGRPRQTRVLDVAAVKEAVEQAIAVAEQRGGKLIDKLDLKQAMNYWRTHTTRIGL
KGCHSPHSLRYAWAQDALAFYQQNGFSRQETRALVSMDLGHGDGRGRYVERVYSRST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 2e-54 58
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 2e-54 58
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 9e-38 50
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 4e-46 49
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 4e-43 48
api85 CAF28559.1 putative integrase Not tested YAPI Protein 3e-39 47
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 1e-37 46
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 1e-37 46