Gene Information

Name : XNC1_3081 (XNC1_3081)
Accession : YP_003713253.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : capsid scaffolding protein (GpO)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3044800 - 3045636 bp
Length : 837 bp
Strand : -
Note : -

DNA sequence :
ATGGCAACAAAATCCAAACCCTTTCGTATCTGTGTGGAAGGTGCCACCACCGACGGCCGTAAAATCCAGCGTGCGTGGCT
GAACCAGATTGCGGACAATTACGACCCGAGCACCTACGGCGCCCGCATCAATCAGGAGCACTACAACTATTCATGGAGTC
CGCGCTTTGGTGATGTCGAATCCGTCTACACCGAAGAAATCAAGGACGGCAAACTGGCCGGCAAGTTAGGCCTGTATGGG
GTGCTCTCCCCCACCGATGAACTGGTGGCAATGAACCGCAAGCGCCAGAAAGTCTATACCTCCGCCGAAATCAACCTTGA
TTTTGCCGACTCCGGCGGCGCGTATCTGGTGGGACTGGCCGTCACTGACAGTCCGGCCAGCCTCGGCACCGAAATGTTGC
AGTTCAGCGCCGGGGCGGCCATCAATCCGCTGACCGCCCGCAAACAGCACCCGGACAATATTTTTACCGCCGCCGAAGAG
ACGGTGCTGGAATTTGTCGAACTGCCGGCTGACAACGACAAGCCGTCCCTGTTCTCCCGTGTGCAGGCGTTCTTCCAGAA
AAAGCAGCAATCCGACGATGCCCGTTTTGCTGACATCCATCAGGCCGTCGAACTGTGCGCCCAGGAGCAACAAACCACGG
CCGAGACCGTCACCACACTGGTGCAACAGCTGGGCGAATTTTCTGCCCTCAAACAGAAACAGGCCACGCTTGAAATCCAG
TTGAATGATCTAACCACCCGGTTGAGCCGGCAAGACAACAACCCCACACACCGACCATTCTCACAGGGATCGCAACACGC
CGATGCCCCCACTGCCGAACACCTGACCAACTGCTAA

Protein sequence :
MATKSKPFRICVEGATTDGRKIQRAWLNQIADNYDPSTYGARINQEHYNYSWSPRFGDVESVYTEEIKDGKLAGKLGLYG
VLSPTDELVAMNRKRQKVYTSAEINLDFADSGGAYLVGLAVTDSPASLGTEMLQFSAGAAINPLTARKQHPDNIFTAAEE
TVLEFVELPADNDKPSLFSRVQAFFQKKQQSDDARFADIHQAVELCAQEQQTTAETVTTLVQQLGEFSALKQKQATLEIQ
LNDLTTRLSRQDNNPTHRPFSQGSQHADAPTAEHLTNC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 3e-56 51
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 3e-56 51
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 8e-42 51