Gene Information

Name : XNC1_2940 (XNC1_2940)
Accession : YP_003713121.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2935037 - 2935993 bp
Length : 957 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence :
ATGTCTGATTATATTGATTCTGCTATATATAACCGGCAGGGCGTGGCGTTAAGCCGTGCCACACTGGGTCGCTGGTCCGG
GGCAGTGAGTGAACTTCTTGAACTCCTGTACGATGTGTTACGCCAGTATGTTCTGATGCCGGGCAAAGTCCATGGCGATG
ATATCCCCGTACCCGTTCAGGCACCAGGCAACGGTAAAACCCGGACCGGACGCCTGTGGGTGTACGTCCGCGATGACAGA
AATGCAGGCTCGGTCATGCCGCCGGCAGTGTGGTTCGCGTACTCAGCAGATCGCAAAGGCGTTCACCCGCAACAGCATCT
GGCAGGCTACAGCGGCGTACTCCAAGCAGATGCTTACGGCGGGTACCGGGCGTTGTATGAAACAGGGAATATCACTGAGG
CCGCCTGCATGGCGCATGCCCGACGTAAAATCCATGACGTTCACGTTCGTTCGCCAACAGCAATAACGACGGAAGCCCAG
AAGCGGATAGGTGAGTTATATGCCATAGAAGCAGAAATCCGAGGCAGCCCGGCAGAAGAACGACTGGCATTAAGAAAAGC
GCGCAGCGCTCCGCTGATGCAGTTGTTGTTCGACGGGATACAGCAGCAGAGGGCAACGCTGTCGCGGCACTCAGAGATAG
CGAAGGCGTTCGCCTACATGCTGAAGTTATGGGACAGTCTGAACGAGTACTGCCGTAACGGCTGGATGGAGATCGACAAT
AATATCGCGGAAAACGCACTGCGTTGCGTCGCTGTTGGGCGAAAAAACGGGTTGTTCGCGGGTTCTGACAGCGGAGGTGA
GCGGGCGGCCATCCTGTACTCATTAATCGGCTCCTGTCGCCTTAATGGTGTAGAACCGGAGGCGTGGTTGCGGTACACCA
TCAGCCATATAGCCGATTGGCCATCAAACAAGGTACACGAGCTGCTTCCCTGGAAACTCAACCTTACCAACATCTAA

Protein sequence :
MSDYIDSAIYNRQGVALSRATLGRWSGAVSELLELLYDVLRQYVLMPGKVHGDDIPVPVQAPGNGKTRTGRLWVYVRDDR
NAGSVMPPAVWFAYSADRKGVHPQQHLAGYSGVLQADAYGGYRALYETGNITEAACMAHARRKIHDVHVRSPTAITTEAQ
KRIGELYAIEAEIRGSPAEERLALRKARSAPLMQLLFDGIQQQRATLSRHSEIAKAFAYMLKLWDSLNEYCRNGWMEIDN
NIAENALRCVAVGRKNGLFAGSDSGGERAAILYSLIGSCRLNGVEPEAWLRYTISHIADWPSNKVHELLPWKLNLTNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2972 NP_708746.1 hypothetical protein Not tested SHI-1 Protein 3e-109 78
unnamed AAK00463.1 unknown Not tested SHI-1 Protein 4e-112 78
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-93 65
unnamed AAL67335.1 L0015-like protein Not tested PAI II CFT073 Protein 7e-52 56
unnamed AAL67373.1 unknown Not tested PAI II CFT073 Protein 4e-51 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_2940 YP_003713121.1 transposase VFG0634 Protein 1e-109 78
XNC1_2940 YP_003713121.1 transposase VFG1700 Protein 3e-93 65