Gene Information

Name : XNC1_2925 (XNC1_2925)
Accession : YP_003713106.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 2923495 - 2924934 bp
Length : 1440 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence : 
ATGGAGACCCCATTCCCTGATGATATCGCCCAGCTGAAAGGGCTGCTGCGTGAGCAGATGGCGGCTAACAAGATACTGAC
AGAAAATAATCGCCTGCTGTCTCCGCGGGTGGCCTCTTATGCCAGCGAAATTAGCCGCCTGAAAGCCCGGGTGGTAAAAC
TGCAACGTATGCAGTTCGGCCAGAGTTCAGAAAAAATACGGCAGAAGGCTGAACGACAGATACGCGAAGTGCAGGCGCAC
ATCAGTCACCTTCAGGAAGAAATGGCCGACATCCTGGGTAAACAACCCGATCCGGCACTGCCTCCTGTGCTGCGGCAGTC
CTCGTCACGAAAACCGTTACCCGCCACCCTGCCCCGCGAAATACAGTTGCTCCTGCCGGCAGAAAAAAACTGCCCTGAAT
GTGGCGGGGAACTGCATACGCTGGGTTGCGATATCTCAGAACAACTCGGGATCATCAGCAGCGCCTTTAAAGTTATCGAA
ACACAACGCCCCAAGCTGGCCTGCGGTCGGTGTGACGGTATAGTCCAGTCTCCCATGCCGTCCAAACCCATTGAACGCAG
TTATGCCGGTCCTGGACTGCTGGCCCGGATCGTGACCGCAAAGTTCGCAGAGCATATGCCGCTGTACCGTCAGTCGGAGA
TATATAACCGGCAGGGCGTGGCGTTAAGCCGTGCCACACTGGGTCGCTGGTCCGGGGCAGTGAGTGAACTTCTTGAACGC
CTGTACGATGTGTTACGCCAGTATGTTCTGATGCCGGGCAAAGTCCATGGCGATGATATCCCCGTACCCGTTCAAGCGCC
AGGCAACGGTAAAACCCGGACCGGACGCCTGTGGGTGTACGTCCGCGATGACAGAAATGCAGGCTCGGTCATGCCGCCGG
CCGTGTGGTTCGCGTACTCAGCAGATCGCAAAGGCATTCACCCGCAACAGCCCCTGGCAGGCTACAGCGGCGTTCTCCAG
GCAGATGCTTACGGCGGGTACCGGGCGTTGTATGAAACAGGGAATATCACTGAGGCCGCCTGCATGGCGCATGCCCGACG
TAAAATCCATGACGTTCACGTTCGTTCGCCAACAGCAATAACGACGGAAGCCCAGAAGCGGATAGGTGAATTATATGCCA
TAGAAGCAGAAATCCGGGGCAGCCCGGCAGAAGAACGGCTGGCATTAAGAAAAGCGCGCAGCGCTCCGCTGATGCAGTTG
CTGTTCGACGGGATACAGCAGCAGAGGGCAACGTTGTCGCGGCACTCAGAGACAGCGAAGGCGTTCGCCTACATGCTGAA
GTTATGGGACAGTCTGAACGAGTACTGCCGTAACGGCTGGGTGGAGATCGACAATAATATCGCGGAAAACGCCCTGCGTT
GCGTCGCTGTTGGGCGAAAAAACTGGTTGTTCGCGGGTTCTGACAGCGGAGGGAGCGGGCGGCCATCCTGTACTCATTAA

Protein sequence : 
METPFPDDIAQLKGLLREQMAANKILTENNRLLSPRVASYASEISRLKARVVKLQRMQFGQSSEKIRQKAERQIREVQAH
ISHLQEEMADILGKQPDPALPPVLRQSSSRKPLPATLPREIQLLLPAEKNCPECGGELHTLGCDISEQLGIISSAFKVIE
TQRPKLACGRCDGIVQSPMPSKPIERSYAGPGLLARIVTAKFAEHMPLYRQSEIYNRQGVALSRATLGRWSGAVSELLER
LYDVLRQYVLMPGKVHGDDIPVPVQAPGNGKTRTGRLWVYVRDDRNAGSVMPPAVWFAYSADRKGIHPQQPLAGYSGVLQ
ADAYGGYRALYETGNITEAACMAHARRKIHDVHVRSPTAITTEAQKRIGELYAIEAEIRGSPAEERLALRKARSAPLMQL
LFDGIQQQRATLSRHSETAKAFAYMLKLWDSLNEYCRNGWVEIDNNIAENALRCVAVGRKNWLFAGSDSGGSGRPSCTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-134 79
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 6e-173 77
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 1e-147 64
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-147 64
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 4e-116 60
unnamed AAC31494.1 L0015 Not tested LEE Protein 4e-121 58
tnp AEA34686.1 transposase Not tested Not named Protein 4e-121 58
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 6e-121 58
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 5e-121 58
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 4e-121 58
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 5e-121 58
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 3e-120 57
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 3e-120 57
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 4e-121 57
unnamed AAL57570.1 unknown Not tested LEE Protein 4e-121 57
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 1e-120 57
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 4e-92 56
unnamed AAL08460.1 unknown Not tested SRL Protein 1e-100 56
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 5e-102 55
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 3e-102 54
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 3e-102 54
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 4e-111 51
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 3e-81 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_2925 YP_003713106.1 transposase VFG1513 Protein 7e-135 79
XNC1_2925 YP_003713106.1 transposase VFG0793 Protein 2e-121 58
XNC1_2925 YP_003713106.1 transposase VFG1516 Protein 2e-92 56
XNC1_2925 YP_003713106.1 transposase VFG1051 Protein 6e-101 56
XNC1_2925 YP_003713106.1 transposase VFG1736 Protein 3e-101 52