Gene Information

Name : XNC1_2695 (XNC1_2695)
Accession : YP_003712895.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : Regulatory protein soxS
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 2656566 - 2656952 bp
Length : 387 bp
Strand : +
Note : -

DNA sequence : 
ATGCCACAAGATAATCACTTAGCACTTGTATGCGCACTGAGTAAATGGATAGAAAACCATCTTGGCCGTGTTATTCATCT
TGAAGAGCTTGCTGCTTACTCTGGCTATTCACTTTGGCACATGCAAAAAATATTCAAAGAAGTCACAGGGATATCGCTTG
GAAAGTACATCAGGCAACGACGCCTGGCCGGCGCAGTTTCTCTGTTGAGAAACAGTTCATTGCCTATTTTTGATATCGCT
TTGGATTTCGGCTTCGGATCTCAATCTCATTTCACATATATGTTCCGTAAAGAATATGGCATTACACCTTATGATTTTCG
TCAGAGTATAGAGATAAAACTTGAAGTGAAACTTCCATTGCATCTGACTTATGACTGTGAAGCCTGA

Protein sequence : 
MPQDNHLALVCALSKWIENHLGRVIHLEELAAYSGYSLWHMQKIFKEVTGISLGKYIRQRRLAGAVSLLRNSSLPIFDIA
LDFGFGSQSHFTYMFRKEYGITPYDFRQSIEIKLEVKLPLHLTYDCEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 1e-19 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_2695 YP_003712895.1 Regulatory protein soxS CP001138.1.gene4488. Protein 3e-20 43
XNC1_2695 YP_003712895.1 Regulatory protein soxS CP000647.1.gene4499. Protein 2e-20 43
XNC1_2695 YP_003712895.1 Regulatory protein soxS CP000034.1.gene4505. Protein 2e-19 42
XNC1_2695 YP_003712895.1 Regulatory protein soxS BAC0371 Protein 9e-20 42
XNC1_2695 YP_003712895.1 Regulatory protein soxS CP001918.1.gene327.p Protein 3e-20 42
XNC1_2695 YP_003712895.1 Regulatory protein soxS NC_002695.1.914293.p Protein 9e-20 42
XNC1_2695 YP_003712895.1 Regulatory protein soxS CP001918.1.gene2033. Protein 1e-15 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_2695 YP_003712895.1 Regulatory protein soxS VFG0585 Protein 3e-20 43