Gene Information

Name : xptC1 (XNC1_2568)
Accession : YP_003712780.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : insecticidal toxin complex protein B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2542055 - 2546482 bp
Length : 4428 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 11286884, 11319082; Product type ph : phenotype

DNA sequence :
ATGGGAGAAGCACTCAATGCCGTCGGAGCGGAAGGGGGAGCGTCATTTTCACTGCCCTTGCCGATCTCTGTCGGGCGTGG
TCTGGTGCCGGTGCTATCACTGAATTACAGCAGTACTGCCGGCAATGGGTCATTCGGGATGGGGTGGCAATGTGGGGTTG
GTTTTATCAGCCTGCGTACCGCCAAGGGCGTTCCGCACTATACGGGACAAGATGAGTATCTCGGGCCGGATGGGGAAGTG
TTGAGTATTGTGCCGGACAGCCAAGGGCAACCAGAGCAACGCACCGCAACCTCACTGTTGGGGACGGTTCTGACACAGCC
GCATACTGTTACCCGCTATCAGTCCCGCGTGGCAGAAAAAATCGTTCGTTTAGAACACTGGCAGCCACAGCAGAGACGTG
AGGAAGAGACGTCTTTTTGGGTACTTTTTACTGCGGATGGTTTAGTGCACCTATTCGGTAAGCATCACCATGCACGTATT
GCTGACCCGCAGGATGAAACCAGAATTGCCCGCTGGCTGATGGAGGAAACCGTCACGCATACCGGGGAACATATTTACTA
TCACTATCGGGCAGAAGACGATCTTGACTGCGATGAGCATGAACTTGCTCAGCATTCAGGTGTTACGGCCCAGCGTTATC
TGGCAAAAGTCAGCTATGGCAATACTCAGCCGGAAACCGCTTTTTTCGCGGTAAAATCAGGTATTCCTGCTGATAATGAC
TGGCTGTTTCATCTGGTATTTGATTACGGTGAGCGCTCATCTTCGCTGAACTCTGTACCCGAATTCAATGTGTCAGAAAA
CAATGTGTCTGAAAACAATGTGTCTGAAAACAATGTGTCTGAAAAATGGCGTTGTCGTCCGGACAGTTTCTCCCGCTATG
AATATGGGTTTGAAATTCGAACCCGTCGCTTGTGTCGCCAAGTTCTGATGTTTCATCAGCTGAAAGCGCTGGCAGGGGAA
AAGGTTGCAGAAGAAACACCGGCGCTGGTTTCCCGTCTTATTCTGGATTATGACCTGAACAACAAGGTTTCCTTGCTGCA
AACGGCCCGCAGACTGGCCCATGAAACGGACGGTACGCCAGTGATGATGTCCCCGCTGGAAATGGATTATCAACGTGTTA
ATCATGGCGTGAATCTGAACTGGCAGTCCATGCCGCAGTTAGAAAAAATGAACACGTTGCAGCCATACCAATTGGTTGAT
TTATATGGAGAAGGAATTTCCGGCGTACTTTATCAGGATACTCAGAAAGCCTGGTGGTACCGTGCTCCGGTACGGGATAT
CACTGCCGAAGGAACGAATGCGGTTACCTATGAGGAGGCCAAACCACTGCCACATATTCCGGCACAACAGGAAAGCGCGA
TGTTGTTGGACATCAATGGTGACGGGCGTCTGGATTGGGTGATTACGGCATCAGGGTTACGGGGCTACCACACCATGTCA
CCGGAAGGTGAATGGACACCCTTTATTCCATTATCCGCTGTGCCAATGGAATATTTCCATCCGCAGGCAAAACTGGCTGA
TATTGATGGGGCTGGGCTGCCTGACTTAGCGCTTATCGGGCCAAATAGTGTACGTGTCTGGTCAAATAATCGGGCAGGAT
GGGATCGCGCTCAGGATGTGATTCATTTGTCAGATATGCCACTGCCGGTTCCCGGCAGAAATGAGCGTCATCTTGTCGCA
TTCAGTGATATGACAGGCTCCGGGCAATCACATCTGGTGGAAGTAACGGCAGATAGCGTGCGCTACTGGCCGAACCTGGG
GCATGGAAAATTTGGTGAGCCTCTGATGATGACAGGCTTCCAGATTAGCGGGGAAACGTTTAACCCCGACAGACTGTATA
TGGTAGACATAGATGGCTCAGGCACCACCGATTTTATTTATGCCCGCAATACTTACCTTGAACTCTATGCCAATGAAAGC
GGCAATCATTTTGCTGAACCTCAGCGTATTGATCTGCCGGATGGGGTACGTTTTGATGATACTTGTCGGTTACAAATAGC
GGATACACAAGGATTAGGGACTGCCAGCATTATTTTGACGATCCCCCATATGAAGGTGCAGCACTGGCGATTGGATATGA
CCATATTCAAGCCTTGGCTGCTGAATGCCGTCAATAACAATATGGGAACAGAAACCACGCTGTATTATCGCAGCTCTGCC
CAGTTCTGGCTGGATGAGAAATTACAGGCTTCTGAATCCGGGATGACGGTGGTCAGCTACTTACCGTTCCCGGTGCATGT
GTTGTGGCGCACGGAAGTGCTGGATGAAATTTCCGGTAACCGATTGACCAGCCATTATCATTACTCACATGGTGCCTGGG
ATGGTCTGGAACGGGAGTTTCGTGGTTTTGGGCGGGTGACGCAAACTGATATTGATTCACGGGCGAGTGCGACACAGGGG
ACACATGCTGAACCACCGGCACCTTCGCGCACGGTTAATTGGTACGGCACTGGCGTACGGGAAGTCGATATTCTTCTGCC
CACGGAATATTGGCAGGGGGATCAACAGGCATTTCCCCATTTTACCCCACGCTTTACCCGTTATGACGAAAAATCCGGTG
GTGATATGACGGTCACGCCGAGCGAACAGGAAGAATACTGGTTACATCGAGCCTTAAAAGGACAACGTTTACGCAGTGAG
CTGTATGGGGATGATGATTCTATACTGGCCGGTACGCCTTATTCAGTGGATGAATCCCGCACCCAAGTACGTTTGTTACC
GGTGATGGTATCGGACGTGCCTGCGGTACTGGTTTCGGTGGCCGAATCCCGCCAATACCGATATGAACGGGTTGCTACCG
ATCCACAGTGCAGCCAAAAGATCGTCCTTAAATCTGATGCGTTAGGATTTCCGCAGGACAATCTTGAGATTGCCTATTCG
AGACGTCCACAGCCTGAGTTCTCGCCTTATCCGGATACCCTGCCCGAAACACTTTTCACCAGCAGTTTCGACGAACAGCA
GATGTTCCTTCGTCTGACACGCCAGCGTTCTTCTTATCATCATCTGAATCATGATGATAATACGTGGATCACAGGGCTTA
TGGATACCTCACGCAGTGACGCACGTATTTATCAAGCCGATAAAGTGCCGGACGGTGGATTTTCCCTTGAATGGTTTTCT
GCCACAGGTGCAGGAGCATTGTTGTTGCCTGATGCCGCAGCCGATTATCTGGGACATCAGCGTGTAGCATATACCGGTCC
AGAAGAACAACCCGCTATTCCTCCGCTGGTGGCATACATTGAAACCGCAGAGTTTGATGAACGATCGTTGGCGGCTTTTG
AGGAGGTGATGGATGAGCAGGAGCTGACAAAACAGCTGAATGATGCGGGCTGGAATACGGCAAAAGTGCCGTTCAGTGAA
AAGACAGATTTCCATGTCTGGGTGGGACAAAAGGAATTTACAGAATATGCCGGTGCAGACGGATTCTATCGGCCATTGGT
GCAACGGGAAACCAAGCTTACAGGTAAAACGACAGTCACGTGGGATAGCCATTACTGTGTTATCACCGCAACAGAGGATG
CGGCTGGCCTGCGTATGCAAGCGCATTACGATTATCGATTTATGGTTGCGGATAACACCACAGATGTCAATGATAACTAT
CACACCGTGACGTTTGATGCACTGGGGAGGGTAACCAGCTTCCGTTTCTGGGGGACTGAAAACGGTGAAAAACAAGGATA
TACCCCTGCGGAAAATGAAACTGTCCCCTTTATTGTCCCCACAACGGTGGATGATGCTCTGGCATTGAAACCCGGTATAC
CTGTTGCAGGGCTGATGGTTTATGCCCCTCTGAGCTGGATGGTTCAGGCCAGCTTTTCTAATGATGGGGAGCTTTATGGA
GAGCTGAAACCGGCTGGGATCATCACTGAAGATGGTTATCTCCTGTCGCTTGCTTTTCGCCGCTGGCAACAAAATAACCC
TGCCGCTGCCATGCCAAAGCAAGTCAATTCACAGAACCCACCCCATGTACTGAGTGTGATCACCGACCGCTATGATGCCG
ATCCGGAACAACAATTACGTCAAACGTTTACGTTTAGTGATGGTTTTGGGCGAACCTTACAAACAGCCGTACGCCATGAA
AGTGGTGAAGCCTGGGTACGTGATGAGTATGGAGCCATTGTGGCTGAAAATCATGGCGCGCCTGAAACGGCGATGACAGA
TTTCCGTTGGGCAGTTTCCGGACGTACAGAATATGACGGAAAAGGCCAAGCCCTGCGTAAGTATCAACCGTATTTCCTGA
ATAGTTGGCAGTACGTCAGTGATGACAGTGCCCGGCAGGATATGTATGCCGATACCCATTACTATGATCCGTTGGGGCGT
GAATATCAGGTTATCACGGCCAAAGGCGGGTTTCGTCGATCCTTATTCACTCCCTGGTTTGTGGTGAATGAAGATGAAAA
TGACACTGCCGGTGAAATGACAGCATAA

Protein sequence :
MGEALNAVGAEGGASFSLPLPISVGRGLVPVLSLNYSSTAGNGSFGMGWQCGVGFISLRTAKGVPHYTGQDEYLGPDGEV
LSIVPDSQGQPEQRTATSLLGTVLTQPHTVTRYQSRVAEKIVRLEHWQPQQRREEETSFWVLFTADGLVHLFGKHHHARI
ADPQDETRIARWLMEETVTHTGEHIYYHYRAEDDLDCDEHELAQHSGVTAQRYLAKVSYGNTQPETAFFAVKSGIPADND
WLFHLVFDYGERSSSLNSVPEFNVSENNVSENNVSENNVSEKWRCRPDSFSRYEYGFEIRTRRLCRQVLMFHQLKALAGE
KVAEETPALVSRLILDYDLNNKVSLLQTARRLAHETDGTPVMMSPLEMDYQRVNHGVNLNWQSMPQLEKMNTLQPYQLVD
LYGEGISGVLYQDTQKAWWYRAPVRDITAEGTNAVTYEEAKPLPHIPAQQESAMLLDINGDGRLDWVITASGLRGYHTMS
PEGEWTPFIPLSAVPMEYFHPQAKLADIDGAGLPDLALIGPNSVRVWSNNRAGWDRAQDVIHLSDMPLPVPGRNERHLVA
FSDMTGSGQSHLVEVTADSVRYWPNLGHGKFGEPLMMTGFQISGETFNPDRLYMVDIDGSGTTDFIYARNTYLELYANES
GNHFAEPQRIDLPDGVRFDDTCRLQIADTQGLGTASIILTIPHMKVQHWRLDMTIFKPWLLNAVNNNMGTETTLYYRSSA
QFWLDEKLQASESGMTVVSYLPFPVHVLWRTEVLDEISGNRLTSHYHYSHGAWDGLEREFRGFGRVTQTDIDSRASATQG
THAEPPAPSRTVNWYGTGVREVDILLPTEYWQGDQQAFPHFTPRFTRYDEKSGGDMTVTPSEQEEYWLHRALKGQRLRSE
LYGDDDSILAGTPYSVDESRTQVRLLPVMVSDVPAVLVSVAESRQYRYERVATDPQCSQKIVLKSDALGFPQDNLEIAYS
RRPQPEFSPYPDTLPETLFTSSFDEQQMFLRLTRQRSSYHHLNHDDNTWITGLMDTSRSDARIYQADKVPDGGFSLEWFS
ATGAGALLLPDAAADYLGHQRVAYTGPEEQPAIPPLVAYIETAEFDERSLAAFEEVMDEQELTKQLNDAGWNTAKVPFSE
KTDFHVWVGQKEFTEYAGADGFYRPLVQRETKLTGKTTVTWDSHYCVITATEDAAGLRMQAHYDYRFMVADNTTDVNDNY
HTVTFDALGRVTSFRFWGTENGEKQGYTPAENETVPFIVPTTVDDALALKPGIPVAGLMVYAPLSWMVQASFSNDGELYG
ELKPAGIITEDGYLLSLAFRRWQQNNPAAAMPKQVNSQNPPHVLSVITDRYDADPEQQLRQTFTFSDGFGRTLQTAVRHE
SGEAWVRDEYGAIVAENHGAPETAMTDFRWAVSGRTEYDGKGQALRKYQPYFLNSWQYVSDDSARQDMYADTHYYDPLGR
EYQVITAKGGFRRSLFTPWFVVNEDENDTAGEMTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcdB2 AAO17202.1 TcdB2 Virulence tcd island Protein 0.0 51
tcdB1 AAL18487.1 TcdB1 Virulence tcd island Protein 0.0 51
tcaC'(2) CAI77376.1 putative insecticidal toxin complex protein Not tested tc-PAIYe Protein 0.0 45