Gene Information

Name : XNC1_2563 (XNC1_2563)
Accession : YP_003712775.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : S : Function unknown
COG ID : COG5464
EC number : -
Position : 2528346 - 2529284 bp
Length : 939 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 11319082; Product type pe : enzyme

DNA sequence :
GTGGCCAGGAAAGCAAAAAAGCCTCACCATGACGCGTTATTCAAACATTTTTTAACCCAACCAGAAACCGCCCGGGAATT
TTTATCCCTTTATCTGCCGGAAGCGATCCGGTCAGTGTGTGATTTAACCACACTAAAACTGGAACCCGGCAGCTTTGTGG
ACAGGCAATTACGTCAGTTGCACAGTGATGTGCTGTATTCTGTCGAGACAACCCACGGGGACGGTTACATTTATTGCCTG
ATTGAACACCAGTCCACGCCTGATCCGTTAATGGCCTGGCGGCTGATGTATTATTCGCTGTCAGCCATGGCTGCGCATCT
GAAAAAAGGACATACTGAACTCCCTTTGGTCGTCCCCCTGCTGTTTTATCATGGTGAGGTGAGGCCTTACCCTTACTCAA
ATCGATGGCTGGATTGTTTTACACTCTCTGAACACGCGGCTCACCTGTATAATCAGCCCCTGCCGTTGGTGGATATCAGT
GCGCTCAGTGATGAAGAGATCCTGACACATAAAAGCATTGCCTTGATGGAGCTGGTACAAAAACATATCCGTTGCCGGGA
TATGCTGGAGTGGGTTCCCCAATTGGTGGCGTTGTTGAATGCCGGTTATAATAGCGCCGAACAGCGCCATGTTGTGTTAA
GCTATATTTTACTGAATGGACATACGCTGGATCTCGCCCAGTTTGTCCATCAACTGACTGAACAATCTCCGGAGCATGAA
ACCATGTTGATGACTATTGCAGAACAGCTTGAACAAAAAGGGCGTGAGCAAGGCCGGACAGAAGGCAGGGCTGAAGGCAG
AACAGAAGGCAGAGCTGAAGGACGGGAAGAAGGCAAGCTGGAAACGGCGCGCGCATTATTACGGCATGGTGTCAGTCTGG
ACATCATTGTCACCAGTACCGGCCTGAGCCGGGAGAAAATTGAAGCGTTAAAGCATTAA

Protein sequence :
MARKAKKPHHDALFKHFLTQPETAREFLSLYLPEAIRSVCDLTTLKLEPGSFVDRQLRQLHSDVLYSVETTHGDGYIYCL
IEHQSTPDPLMAWRLMYYSLSAMAAHLKKGHTELPLVVPLLFYHGEVRPYPYSNRWLDCFTLSEHAAHLYNQPLPLVDIS
ALSDEEILTHKSIALMELVQKHIRCRDMLEWVPQLVALLNAGYNSAEQRHVVLSYILLNGHTLDLAQFVHQLTEQSPEHE
TMLMTIAEQLEQKGREQGRTEGRAEGRTEGRAEGREEGKLETARALLRHGVSLDIIVTSTGLSREKIEALKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 5e-78 56
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 5e-72 50
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 5e-70 50
pilW CAF28495.1 putative transposase Not tested YAPI Protein 1e-68 49
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 4e-66 48