Gene Information

Name : tcaC (XNC1_2335)
Accession : YP_003712569.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : insecticidal toxin complex protein B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2280669 - 2285228 bp
Length : 4560 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type ph : phenotype

DNA sequence :
ATGACTTCAACATCTTCATCTGACAACCTGAGACTGATACCCCCGACCTTACCCAAGGGAGGCGGCTCTTTACAGGGGAT
GCCCACCACGCCGGGGGCGATGGGGCCAAATGGGCAGGCGGGCTTTCAATTGCCCTTTCCTGTCAGTGCCGGGCGGGGAT
ATAGCCCGGCTTTGTCGCTGAGCTATCAGGGCGGCTCAGGTAACGGCTCATTCGGCGTAAGCTGGCATTGTGATGTTCCC
GCCATTCGTCGTCGTACCCATCGCGGCGTACCGACCTATACCGATCAGGACACTTTTCTGGGTCCCGACGGGGAAGCGCT
GGTGCCAGAACAGGATGCACAAGGCAATCCCATCACGACTTCGGTTAATACCTGGCATGACCGTAAACTGCCACAAATCT
GGCAGGTCACCCGCTATTTTCCGCGTGTGGAAGGCGATTTTGCCCGCATTGAACGCTGGCAGGTGACCGGAGAGGCCGAT
TTTTGGCTGGTACATCACACCAATGGCGAGGTTTTGTGTCTGGGCAAAACGGCTCAGGCGCGCATTGCTGACTCCGCAGA
GCCGAAGGTTCGTATTGCAGCCTGGCTGGCGGAAGAATCAGTGTCTCCAACCGGTGAACATATTTATTATCAGTACATCA
ACGCTGCCGATGCAGGAGTCCGTGATCCAGCAGGACGTGATACCCACAACCAGCGTACTTTACAGGCGGTGTTGTATGGC
AATGTCACCGCTCAATCAGATCTGTTTCTATGGGACGGTGACGCTGAGCCAGCCCGTCAAGACTGGCTGTTTACTCTGGT
ACTGGACTACGGTGCCCGCAGTATGGACAGCACGGTTCCGCCCGCATTGACGCTGCCAGATAAGGCGACCTGGCCAGTTC
GTCAAGATGCTTTCTCAACCTACGAGACGGGTTTTGAAGTGAGAACTCACTTCCTCTGTCGTCAGGTATTAATGTTTCAT
CACTTCCCGACCGAACTGGGAGAAGCCGCCACTTTGGTGAATCGTCTGTTGATAACCTATGATGAAAACCCCGTGTTATC
CCGTTTGGTTAGCGTGCAGACTTTGGCCTATGAGCCGGATGACACACACACCTTAAAGTGCCTGCCGCCAACGACGATAG
ATTATACTCCGTTTACCCTGAAGACCGGGGCCGGAAACTGGCATTCCATGACATTGCCGGACAGTTTGGGACTCGCCTCT
TATCACCTGATTGACCTGTATGGTGAAGGTCTCAGCGGCCTGCTATATCAGGAAGGGGCGGGGTGGTATTACCGTCCGCC
GATGCGGGATCTGTCTCCCGGGGCAGAATCGGATGCCGTCGTATTCGGCGATTGGGAAGCCCTGCCGACAATTCCCTCTA
TGCAGCAAGGCACGAACGTGAGTCTGTTGGACATCAATGGGGATGGTCGGCTGGAGTGGTTGATCATACAACCTGACGGT
CCGGCAGGGTATTACATCTTACAGGCCAACCGGACTTGGTCTGCGTTTACCCCATTGACTCAACTGCCTTTGGAGTATCT
GCATCCTGATGTGACGTTTGCTGATCTGCATGGGGGTGGCCTGCCTGATCTTGCCATGATTGGTCCGCACAGCGTGCGCC
TGTATATCAATGAGTGTACCGGGTTTGACAGAGGACGTATGGTGATGCAGGACACCGACATAAATCTGCCAATGAAGGGA
CGAGATCAGCAGGAGTTGGTGGCCTTTTGCGACATGCTCGGTTCAGGACAGATGCATTTGGTCAGTGTGCGTCACGATCG
TGTTCTGTGTTGGCCCAACTTGGGAAATGGGCACTTTGGTGCGCCATTGACGCTTTGTGACACCCTGCCATTTGATGCAG
TGCGTTTTAATCCACGGCAGATTTATCTGGTTGATGTGGATGGCTCAGGAACCACTGACCTAGTGTACGCTGATCCGGCG
GGTATTCACCTGTTTCTCAATCAGGCGGGTAATACCCTGTCCTCCCCCCTCTGTCTGCCTTACCCCGATGGCGTGGCCTA
TGACCAGCTGAGTCAGTTGAGTTTTGCCGACCTTTCCGGCCAGGGTACCGTAAGTTGCGTGTTGACACAGTACGCACGGG
GCGCGGATTTGCATCCGTTGAGCTGGCGTTATGACTTGTCCTCCCGCAAGCCGTACCTGCTGACGACGATGGATAATCAG
TGCGGTGCCCGCACAATACTGACGCATCGCAGTTCGGCGCAGGAATGGTTGGATGAGAAACAGGGTTCGCCCGATGCCAG
TCCCGGGATACCGTTCCCCCTCCTGGTCGTGAGCCGTGTCATGCAGCAAGATGACCTGACCGGTAATACTTTGGTTCAGA
CATATCGTTACCGCCGGGGCCTCTGGGACGGTGTGGAACGGGAGTTCCGCGGCTTCGGGTATGTGGAAGAACAGGATGGT
GAGGAGAGCGCGAGCGCATTAGCGGTCTGTCCGTTACGCATTTGCAGCTGGTATCACACGGGCCGTCAGGAAGATACCCA
AGTGCTGTACGGCCGCCCTTACGTCGATTCCGATGCCTTTACGTTGGGGGATACCCGCCTGACCCGCTGGACAGGGGATG
CCGATGACGGGCATGACGCGGCTTTCACGCCGGATACGCAGACTGGCTGGTGGCTGCATCGGGCATTGAAGGGAACGTTA
TTGCGCCGGGAGCACTATGGTCTGGATGGTACGCCAGCCGCCGCCGTGCCTTATACGGTCAGTCAATCGCGCTGTCAGGT
TCGCCTGGTACAAGCGGGTGATATGCCTGTTGTCCTGCCACTCAGTGCTGGCGAAATCACCTATCACTATGAGCGGGTGG
CAAGTGACCCACAAGTTACTCAGTCTATTCCTTTGCAGTATGACAGTTATGGACACGGTTTGTGGACAATCAATGTCAAT
TACCCGCGCCGCCTGACGGCTGACAGCCCCAACCCTTATACTGCAACGGCGTTGCCCGACAGTGCCTGGTCAGCCACTTT
TGATGAGCAGCAGACGTTGTTACGCCTGACGGAAAACCGCATCCAGATGCGCAATCAGCCTGATGCTCAAGCCTGGGTGC
TGGGTATCCCGGAGATTACCCGCCAGAATATGTTGACTTATCCCGGCAGTCAAAGCCCGAAACAGGGGCTAACGCTGGAG
GCATTGAGCACCTCAGATGGCCTGCTGGGCTCAAATCAGCCTCGTGTATTGGTGGGGTTAATCCGGCATCATTACCACAG
TAACGCCAGCCAACCCAAAAACCTCATTTTGCCGGCTCACACCGAGACAGCCTTGCTGAGAGATGAAGATCTGAAAGCCT
ATGACGGTGTACTGACGGCGGAACAACGTCAAAAATGGCTCACGGAGGGGGGATATCACACTATGCCTGCCTTACTGTCT
GCACCGGGCGTGACGGATGAACCTGCCGTATGGGCGGGTAACACAGGTTTTATGACCTATTTGGGTGCACCGCACTTCTG
GCGGCCACATACTCAAACCCCTGCCCGGCTCCCCGGCGCGGATGGCGTGTCGCCCGTATTGACCGCCACCTGGGACAGCT
ATGACTGTTGCCTGTTGAGCAGTATGGATGCGTACGGGAATACGACTCAGGCCGACATAGACTATCGTTTCTTAATCCCC
CGCCGGGTCACAGATATCAATGACAATCGGCATGAAGTGCAGCTGGATGCTTTGGGACGTGTGGTGGCAACCAGCCGGTA
CGGCACCGAATTAGGTGATAATGGCACTTCATCGGTTAATGTGGGATTTTCACCGTTGAATACGCATCCCGCCCCCGTGC
AGGACACCGTTGAGGCGGCTGTAGCACATGCACTGGCGGTCAATCAGGGCAAAGCCACCCAGCCACAGGCCACTCGCGTG
GTTTATGACGTGTTGTGCCGGATGGGGCAACTGACCACAACCCATTTGAAGCAGGTGACGGCCAGCGAATCAGATATCGC
GGCTTTGCACCTGCGTTTGCAGGCGCTGCGGTTTATAACTGCGCAGGGGCATATCTTGTCGCCCGGCTGGCAATGGGTGG
ACTCTGATAAGGTGACCGAGGGCGTGCCGGATGCCCTGCGGGAAGTCATGAAGAGCGTGCCACGTCAGCCGATACACTAC
GCGATATTGGCGGCGGATGCTTATCCGGATAACCCCCAGCAGGTGAATGTTCAGGTGGCTTACCGTGATGGTTTTGGCCG
TGCCCTGCAAGGGACGGCGCTGGTTCCTGCCGGATCAGCCTACGAGCGTACGGATGACGGCGAACTGGCATTCGAGGATG
GGCATTTGGTCACGGTGCCGGCGGAGCCACGCTGGACGGTGACCGGCCGGGTGGAATACAACCTTAAGGGGCAAACCGTG
CGTGTCTACCAACCCTATTTTGTGAATAATTGGCGCGCGGTGGCCGATACCGCCCTGCGTGCACACGGTTATGCCGATAC
GCATTATTACGATGCGACAGGACGGGAAATTCGGGTGGTAACAGCCAAAGGGGAAGTGCGCCGTCAGGGATATACTCCCT
GGTTTATTGTGGCAGAAGATGAGAATGATACCGCCAGTGAAATAATGGCAATGCGACCAATGGAGACTGACCATGAGTGA

Protein sequence :
MTSTSSSDNLRLIPPTLPKGGGSLQGMPTTPGAMGPNGQAGFQLPFPVSAGRGYSPALSLSYQGGSGNGSFGVSWHCDVP
AIRRRTHRGVPTYTDQDTFLGPDGEALVPEQDAQGNPITTSVNTWHDRKLPQIWQVTRYFPRVEGDFARIERWQVTGEAD
FWLVHHTNGEVLCLGKTAQARIADSAEPKVRIAAWLAEESVSPTGEHIYYQYINAADAGVRDPAGRDTHNQRTLQAVLYG
NVTAQSDLFLWDGDAEPARQDWLFTLVLDYGARSMDSTVPPALTLPDKATWPVRQDAFSTYETGFEVRTHFLCRQVLMFH
HFPTELGEAATLVNRLLITYDENPVLSRLVSVQTLAYEPDDTHTLKCLPPTTIDYTPFTLKTGAGNWHSMTLPDSLGLAS
YHLIDLYGEGLSGLLYQEGAGWYYRPPMRDLSPGAESDAVVFGDWEALPTIPSMQQGTNVSLLDINGDGRLEWLIIQPDG
PAGYYILQANRTWSAFTPLTQLPLEYLHPDVTFADLHGGGLPDLAMIGPHSVRLYINECTGFDRGRMVMQDTDINLPMKG
RDQQELVAFCDMLGSGQMHLVSVRHDRVLCWPNLGNGHFGAPLTLCDTLPFDAVRFNPRQIYLVDVDGSGTTDLVYADPA
GIHLFLNQAGNTLSSPLCLPYPDGVAYDQLSQLSFADLSGQGTVSCVLTQYARGADLHPLSWRYDLSSRKPYLLTTMDNQ
CGARTILTHRSSAQEWLDEKQGSPDASPGIPFPLLVVSRVMQQDDLTGNTLVQTYRYRRGLWDGVEREFRGFGYVEEQDG
EESASALAVCPLRICSWYHTGRQEDTQVLYGRPYVDSDAFTLGDTRLTRWTGDADDGHDAAFTPDTQTGWWLHRALKGTL
LRREHYGLDGTPAAAVPYTVSQSRCQVRLVQAGDMPVVLPLSAGEITYHYERVASDPQVTQSIPLQYDSYGHGLWTINVN
YPRRLTADSPNPYTATALPDSAWSATFDEQQTLLRLTENRIQMRNQPDAQAWVLGIPEITRQNMLTYPGSQSPKQGLTLE
ALSTSDGLLGSNQPRVLVGLIRHHYHSNASQPKNLILPAHTETALLRDEDLKAYDGVLTAEQRQKWLTEGGYHTMPALLS
APGVTDEPAVWAGNTGFMTYLGAPHFWRPHTQTPARLPGADGVSPVLTATWDSYDCCLLSSMDAYGNTTQADIDYRFLIP
RRVTDINDNRHEVQLDALGRVVATSRYGTELGDNGTSSVNVGFSPLNTHPAPVQDTVEAAVAHALAVNQGKATQPQATRV
VYDVLCRMGQLTTTHLKQVTASESDIAALHLRLQALRFITAQGHILSPGWQWVDSDKVTEGVPDALREVMKSVPRQPIHY
AILAADAYPDNPQQVNVQVAYRDGFGRALQGTALVPAGSAYERTDDGELAFEDGHLVTVPAEPRWTVTGRVEYNLKGQTV
RVYQPYFVNNWRAVADTALRAHGYADTHYYDATGREIRVVTAKGEVRRQGYTPWFIVAEDENDTASEIMAMRPMETDHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcdB2 AAO17202.1 TcdB2 Virulence tcd island Protein 0.0 41
tcdB1 AAL18487.1 TcdB1 Virulence tcd island Protein 0.0 41
tcaC'(2) CAI77376.1 putative insecticidal toxin complex protein Not tested tc-PAIYe Protein 0.0 41