Gene Information

Name : tcdB2 (XNC1_2186)
Accession : YP_003712425.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : insecticidal toxin complex protein B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2106427 - 2110977 bp
Length : 4551 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 11286884, 11319082; Product type f : factor

DNA sequence :
ATGAAACAATCATCGACATTCAGTGTTACCGAATTATCTCTGCCTAAAGGTGGCGGCAATATCACAGGTATGGGCGAAGC
TATGACACCTGCCGGGCCTGATGGTATGGCAGGCCTTTCCCTGCCCTTGCCCATTTCAGCGGGACGGGGTTATGCCCCTT
CATTAAGCCTGAGTTACAGCAGTGGCCTCGGCAATGGCCCGTTTGGTTTGGGATGGCAGTGCCCTGTTATGGCGATCCGT
CGCCGTACGCATCGCGGTGTTCCTCATTATGACAAAACGGACACTTTTCTGGGACCAGACGGTGAAGTACTGGTTGCTGC
ATTAAATGAAACGCAGCAGCCGGATATTCGTTCTGCTTCCACGCTGCAAGGTGTTGAATTGGGCGATAATTATATCGTTA
CCGGCTATCATTCACGGCAGGAACAGCAATTTAATCGTTTTGAATATTGGCAACCAAAAACCAAACCGCAACAAGGTGAT
TTCTGGCTTATTTACGGTACTGACGGACAAAAGCATTTACTGGGTAGAAACACCGAGGCACGAATTTTCAATCCCCAACA
AACCAAATCACAACACACTGAGCAAACTGCCCAGTGGTTATTAGAGTCTTCCGTTTCAACCCACGGTGAGCAAATTTATT
ATGAGTACCGTTGTGAAGACGATATGGCATGTAGTCTTACCGAGATTCAATTACATCCACAATCGCGTTCCCAACGTTAT
CTGTTCGCGGTACATTACGGCAATATTTCGGCCAGTGATCAATTATTAGGATTGGACACCAATAAAAAAATATCAATCGA
TAACTGGTTGTTTCATCTGGTATTTGATTATGGTGAGCGTTCTGTTCAACTCTCGGACAAACCTGCTTTTACTTCTTCAA
AAAAATGGCTATGTCGTGAAGACTGCTTCTCACGCTATGAATATGGCTTTGAGGTACGCACCCGACGCTTATGCCGCCAA
ATTCTGATGTATCACAACATTAAAGCCCTGGATCCCTCTGCCAATAACGACGATATAGATCAGATAGCGCTTGTTGTCCG
TTTGATACTGCAATATGACGAGAAAGCGGTTGCCAGCACATTAACGATGATCCAACGTGTCGGCCATGAAATTGAGAAAG
ACAAATCCGGTGTTTTTCATGCCCTGCCACCACTGGAATTAAGTTATCAGCCTTTTGAACTTAAACAGCACTCACAATGG
CAATCCATGGAAATGCCTGCCAGTTTTTATCCTCACCAACATTGGCAGTTTGTCGACCTCAAGGGTGAAGGGATTCCGGG
GCTGTTATATCAGGAACGTGGCTCGTGGTGGTATCGTGCGCCACAACGATCTCCTGGTAAAAATCAACCAGATGCTGTCA
TTTGGGATGATATTCAGCCCCTGCCTGCGATTCCTTCCCTGCAAGAAAATGCCAGCCTGTTTGATATTAATGGTGACGGA
CAACTTGACTGGATCATAACCGGCTCTGGATTACAGGGCTATTATAGCCAGCGGCCGGACGGAGACTGGACAAATTTCAC
GCCTATCCAAGCGTTACCCGTGGAATATTTTCATCCTCGTGCACAGCTGGCAGATATCATTGGTGCCGGATTATCTGACC
TTGTATTGATTGGCCCGAAAAGCGTTCGTTTATACGCCAATCAACGCACAGGGTTCAATACCGGACAAACCGTGATCCAA
TCTGAGGGAATTACATTGCCAATACCGGGAATGGACGCCCGTCGATTAGTGGCATTTAGTGATATGCTCGGTTCTGGGCA
AGCGCATTTGGTGGAAATCAATGCAAATGGTGTGACCTGCTGGCCAAACTTAGGACAAGGCCGTTTTGGGCAGCCGCTCG
CTTTATCGGGGTTTAATCTGCCGGAAAATGATTTTAACCCCGACCGTGTTTATCTGGCCGATATCGATAGCAGCGGCACA
ACTGATTTGATTTATGCCTGTGCTGATCATCTGAGGATTTTTATTAATCAAAGCGGAAATCATTTTGTGGAATCGGAAAC
CTTGCCACTCCCCCAAAATATGCGTTTTGATAACACCTGCCAGCTACAAGTTGCCGATATTCAGGGACTGGGTGTTGCCA
GCCTGATATTGAGTCAGGCTCATGGCGGGCAACAGAATAGTACTCAGCACTGGCGTTATGACTTAGCCAAACAAAAACCG
TGGCTGCTGAATGAAATGAACAATAATATAGGGGCACACCATACTCTGCATTACCGCAGTTCTGCCCAGTTCTGGCTGGA
TGAAAAAGCGGCCTTAATCGCAGCAGGTAAAAAACCAGTTTGTTATTTACCCTTCCCGATACACACATTATGGCAAACCG
AAATCACTGATGAAATTTCTGGAAATAGGCTTATCAATGAAGTCAGATACAAACATGGGGCCTGGGATCGTTGTGAACGC
GAGTTTCGTGGTTTTGGCTATGTTGAGCAACGTGATACGAACCAACGCGCGCAAGGCAGTGCTTCTGAAAGGACCGCCCC
TGCATTAAGCAAAAACTGGTATGCCACGGGTTTGCCGGAGATAGATAAAAATTTGTCAGAGCAATACTGGCAAGGAGATC
AAAAAGCATTTGCTCAGTTTAACCCACGTTTCACAATCTGGAAAAATAATGATGATGCTCCTTTAACCACACCGGATACG
CTCAACGATTACTGGTTTAACCGTGCCTTAAAAGGACAATTATTACGTAGTGAATTGTACGGGTTGGATAATAATTCACA
GGAATCTATTCCCTATACCGTCAGTGAGCATCGCCCACAAGTGCGCCGATTTCCTGCGGAGGGTAATCAATTTATCTATT
GGACATCCGTACTGGAAAGCCGCCAGTATCATTACGAGCGAATCAGCCGTGATCCGCAATGTAATCAGAGTGTTACCCTA
AAAACGGATAAATATGGTCATCCATTGCAGCAGATCAGTATTCAATATCCGCGCAGACCACTTTCTGACATACAACATGC
CTACCCCAAAACATTACCAGCCAATCTGCCAAAAGATAGCGATGATAAACAGCAACACGTACTGCGACTGAACCATCAAT
TATCCAATTGGTATCATTTGGTTGATACTGAATACCGTGTATTGGGGTTACCCCATGAAACACGCCAAGATGCGTTTATT
TATAATGAGAATGAAACGCCGGCCAATGGGTTTACCCTGGAAAAGGTGAATGAGCTCCTGAAATCAGATAAGTCTTCGCC
GGAATATCTCGGTCAACAACGTACATTTTATACTGATGGCAGTGGTAAAAAACCGATAGCGAAACCCACGCCACAGGCAT
TGGTTGCTTTTACTGAAACCGCAATATTTACCAAATCGCAGCTATCGTCAGTTTTCGATGGCAAAATGACAGAGCAAGAA
CGCAATGATCTTTTAAAACAAGGCGGCTATCAGAAAGGAAATATCGTCTGCTTTGATACAAAGAAAAAAGATAAGAAAAA
TTCCCCTGAAATATGGGTAGCCCGTCAAGGCTATACCAACTATGGCGGCTCTGAGCAATTCTGGCGCCCAATGACACAAC
GAAACTCCCTGTTAACAGGTCAATACCGGCTGACATGGGATCCTCATTATTGTGTGATAACAAAAACCAAAGATGCAGCC
GGATTAACCACCAGAGTAAAGAAATATGACTGGCGCTTTTTGCTGCCCGTTCATCTGGTTGATATCAATGATAACCATCA
TTTTGTGACGTTGGATACACTTGGACGTTTCATCACCCAGCGTTTTTGGGGGACAGAAGAAGGTAAAACAGCAGGTTATT
CTGAACCTCAAGATGCCCCTTTCCCGACATCAGAACAGCCTGCATCTGATTGTGATACCACCATCAAACAATTAGTTGTG
CAAGGTAAGCCTTTACCCGTTGCCAACTACCAGCTTTATTACCCTGCAAGCTGGATGCTTTCACTAAAAAACAAAAAAGT
GACTTCGCTGCTAAATTCCTCTGACTGGCAAGCTCTGGATAAGCAAACAATTTCAACTGAAGATGGTTATATCCGTACTC
TCTCTTTACACCGCTGGATTGAGAAACAACTCAATCACACCATTCTGAAAGCGCAGTTAAACCAGCTTTCTCGTTTGCCG
CCACACAGCCTGACATTGATCACTGATCGTTATGATTCTGATTCCAGACAGCAAATTCACCAACAAGTTATATTCAGTGA
TGGCTTTGGCCGCCCGTTACAATCCGCAATGAGACATGAAGAAGGAGAAGCATGGCAACGCACATCGGATGGCAAGCTTA
TTGCTAAACTGGAAAAAACAAAATATCGTTGGGCGGTAACCGGACGCACTGAATATGATAACAAAGGGCAAGTAATACGT
TCCTATCAACCTTATTATCTGGATGATTGGCGTTACGTCACTGATGACAGTACCCGCAAGAACGCTTATGCCGATACGCA
TTATTATGATCCGGTTGGGCGGGAAATATCGGTTAAAACCGCCAAAGACTGGTTGCGGCGGGTACAATATTATCCGTGGT
TTACTGTCAGTGAAGATGAAAATGATACGGCTGCTGAAATAGCAGAAAAAACATCAAAAACAACGCCATAA

Protein sequence :
MKQSSTFSVTELSLPKGGGNITGMGEAMTPAGPDGMAGLSLPLPISAGRGYAPSLSLSYSSGLGNGPFGLGWQCPVMAIR
RRTHRGVPHYDKTDTFLGPDGEVLVAALNETQQPDIRSASTLQGVELGDNYIVTGYHSRQEQQFNRFEYWQPKTKPQQGD
FWLIYGTDGQKHLLGRNTEARIFNPQQTKSQHTEQTAQWLLESSVSTHGEQIYYEYRCEDDMACSLTEIQLHPQSRSQRY
LFAVHYGNISASDQLLGLDTNKKISIDNWLFHLVFDYGERSVQLSDKPAFTSSKKWLCREDCFSRYEYGFEVRTRRLCRQ
ILMYHNIKALDPSANNDDIDQIALVVRLILQYDEKAVASTLTMIQRVGHEIEKDKSGVFHALPPLELSYQPFELKQHSQW
QSMEMPASFYPHQHWQFVDLKGEGIPGLLYQERGSWWYRAPQRSPGKNQPDAVIWDDIQPLPAIPSLQENASLFDINGDG
QLDWIITGSGLQGYYSQRPDGDWTNFTPIQALPVEYFHPRAQLADIIGAGLSDLVLIGPKSVRLYANQRTGFNTGQTVIQ
SEGITLPIPGMDARRLVAFSDMLGSGQAHLVEINANGVTCWPNLGQGRFGQPLALSGFNLPENDFNPDRVYLADIDSSGT
TDLIYACADHLRIFINQSGNHFVESETLPLPQNMRFDNTCQLQVADIQGLGVASLILSQAHGGQQNSTQHWRYDLAKQKP
WLLNEMNNNIGAHHTLHYRSSAQFWLDEKAALIAAGKKPVCYLPFPIHTLWQTEITDEISGNRLINEVRYKHGAWDRCER
EFRGFGYVEQRDTNQRAQGSASERTAPALSKNWYATGLPEIDKNLSEQYWQGDQKAFAQFNPRFTIWKNNDDAPLTTPDT
LNDYWFNRALKGQLLRSELYGLDNNSQESIPYTVSEHRPQVRRFPAEGNQFIYWTSVLESRQYHYERISRDPQCNQSVTL
KTDKYGHPLQQISIQYPRRPLSDIQHAYPKTLPANLPKDSDDKQQHVLRLNHQLSNWYHLVDTEYRVLGLPHETRQDAFI
YNENETPANGFTLEKVNELLKSDKSSPEYLGQQRTFYTDGSGKKPIAKPTPQALVAFTETAIFTKSQLSSVFDGKMTEQE
RNDLLKQGGYQKGNIVCFDTKKKDKKNSPEIWVARQGYTNYGGSEQFWRPMTQRNSLLTGQYRLTWDPHYCVITKTKDAA
GLTTRVKKYDWRFLLPVHLVDINDNHHFVTLDTLGRFITQRFWGTEEGKTAGYSEPQDAPFPTSEQPASDCDTTIKQLVV
QGKPLPVANYQLYYPASWMLSLKNKKVTSLLNSSDWQALDKQTISTEDGYIRTLSLHRWIEKQLNHTILKAQLNQLSRLP
PHSLTLITDRYDSDSRQQIHQQVIFSDGFGRPLQSAMRHEEGEAWQRTSDGKLIAKLEKTKYRWAVTGRTEYDNKGQVIR
SYQPYYLDDWRYVTDDSTRKNAYADTHYYDPVGREISVKTAKDWLRRVQYYPWFTVSEDENDTAAEIAEKTSKTTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcdB2 AAO17202.1 TcdB2 Virulence tcd island Protein 0.0 62
tcdB1 AAL18487.1 TcdB1 Virulence tcd island Protein 0.0 61
tcaC'(2) CAI77376.1 putative insecticidal toxin complex protein Not tested tc-PAIYe Protein 0.0 45