Gene Information

Name : XNC1_2058 (XNC1_2058)
Accession : YP_003712298.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : insertion element iso-IS1n protein insB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 1982134 - 1982487 bp
Length : 354 bp
Strand : -
Note : -

DNA sequence : 
GTGGGGAGTAAGAAAAATCAGCGCGGACTCTGGTATGCCTGGGAGCCGCGTATGAAACGGATAGTGGCACCTACTTTTGG
GGAGCGCAGCAGAAAAACATTGGAAAAACTACTGGCACTCTTGTCACCCTTTAATATCCGGTTTTACTGCACGGATGATT
ATGCCGTTTATGATTGTCTTCCTGAAGAAGTCCATCTTACTGGAAAGATATTTACCCAACGTATAGAGAGAACCAACCTT
ACCCATCGTACCCGAATAAAAAGGCGGAATAGAAAAACAATCGGTTATTCCAAATCTGAAGACATGCACGATAAAGTGAT
AGGCACTTTCATTGAGCGTGAAAACTATATTTAG

Protein sequence : 
MGSKKNQRGLWYAWEPRMKRIVAPTFGERSRKTLEKLLALLSPFNIRFYCTDDYAVYDCLPEEVHLTGKIFTQRIERTNL
THRTRIKRRNRKTIGYSKSEDMHDKVIGTFIERENYI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 1e-14 44
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 1e-14 43
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 2e-14 43
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 2e-14 43
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-14 43
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 5e-15 43
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 5e-15 43
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 5e-15 43
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 1e-14 43
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 6e-13 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_2058 YP_003712298.1 insertion element iso-IS1n protein insB VFG0612 Protein 2e-13 42