Gene Information

Name : XNC1_1823 (XNC1_1823)
Accession : YP_003712067.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : Periplasmic chelated iron-binding protein yfeA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1750049 - 1750963 bp
Length : 915 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 15908408, 9495751; Product type m : membrane component

DNA sequence : 
ATGAACATAAAACGTTCTCTCTTTGCTTTACCAATTTTTAGTATGGTCATTGCACTATTAACAATAACTCTATTCAGTCA
GCGAGCCCATGCAGATAAAAAATTTAGAGTTGTTACAACATTTACCATTATTCAAGATATGGCTCAAAATATTGCAGGCG
ATGCCGCAATTGTCGAATCCATTACAAAAGCAGGTGCAGAAATCCATGATTACCAACCTACACCAAAAGATATTATCAAA
GCACAACGTGCCGACCTCATTCTTTGGAATGGCTTAAACCTTGAACGTTGGTTTGAGCGCTTTTTTGAGAACATGAAAGA
TATACCTGTTGCCATCATTACTGAAGGCATTACTCCTTTACCCATTCGGGAAGGACCTTACAATAAAAACCCTAATCCTC
ATGCTTGGATGTCTCCCAGAAATGCACTGATTTATATCGAAAATATTCGTAAAGCCCTCGTTCAATACGATCCAGCCAAT
GCTGAAATTTATAACCGCAATGCCAAAATATATGCAGAAAGAATAGCTCAGTTAGATATACCGCTTAGAGAACGTCTTTC
CCGCATTCCAGCAGATCAACGATGGCTGGTGACCAGTGAAGGTGCTTTCAGCTATCTCACGCACGATTATGGCTTCAAGG
AAGTCTATTTATGGCCAATCAACGCAGAGGAACAAGGTTCCCCTCAGCAGGTTCGCCGTATTATAGATACAGTAAGGACT
CATAAAATTCCTGTTGTATTCAGTGAAAGTACAGTGTCAGATAAGCCAGCAAAACAAGTCAGTAAAGAAACAGGCGCTCA
TTATGGTGGAGTACTCTATGTAGATTCGCTCTCTACTTCAAAAGGACCTGTACCGACATATATTGACCTGCTTAACACGA
CTGTTGACACCATTGCAAAAGGATTTAATCAATGA

Protein sequence : 
MNIKRSLFALPIFSMVIALLTITLFSQRAHADKKFRVVTTFTIIQDMAQNIAGDAAIVESITKAGAEIHDYQPTPKDIIK
AQRADLILWNGLNLERWFERFFENMKDIPVAIITEGITPLPIREGPYNKNPNPHAWMSPRNALIYIENIRKALVQYDPAN
AEIYNRNAKIYAERIAQLDIPLRERLSRIPADQRWLVTSEGAFSYLTHDYGFKEVYLWPINAEEQGSPQQVRRIIDTVRT
HKIPVVFSESTVSDKPAKQVSKETGAHYGGVLYVDSLSTSKGPVPTYIDLLNTTVDTIAKGFNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 5e-93 63
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 5e-93 63
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-93 63
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 5e-93 63
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-93 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_1823 YP_003712067.1 Periplasmic chelated iron-binding protein yfeA BAC0439 Protein 4e-112 76
XNC1_1823 YP_003712067.1 Periplasmic chelated iron-binding protein yfeA BAC0349 Protein 2e-93 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_1823 YP_003712067.1 Periplasmic chelated iron-binding protein yfeA VFG0525 Protein 2e-93 63