Gene Information

Name : XNC1_1822 (XNC1_1822)
Accession : YP_003712066.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : Chelated iron transport system membrane protein yfeB
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1749141 - 1750052 bp
Length : 912 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 15908408, 9495751; Product type m : membrane component

DNA sequence : 
ATGAAACGCTCATCGTTAAACCGCCAGCCGCTGTTTGAGCAGCCTCATCTGGTCGTTGATAATGCTACTGTGACTTACAA
CAATGGGCATACTGCCATTTATGATGCCAGCTTTGACATCACCGGAGGCACAATTTGTGCTCTAGTCGGTATGAACGGTA
GCGGAAAATCTACTCTATTTAAAACAATCATGGGGTTAGTTACTCCTTCACAAGGAAAAGTCACTCTCAATACACAATCG
ATCAAAGCAGCGCTAAAACAAAATATCATTGCATATGTCCCACAAACTGAAGAGGTTGACTGGAATTTCCCGGTTTTAGT
TTCTGACGTCGTGATGATGGGCCGATACGGAAAAATGGGGTTCTTACGTCGGCCTGGCAAACGGGATCATCAAATCGTGG
GCGAAGCTCTTGAACGCGTTGGTCTGACGGACCTACGCGATCGCCAAATTGGTGAGCTTTCCGGTGGTCAGAAAAAAAGA
GCCTTTTTAGCCCGGGCACTTGCCCAGGAAGGAAAAGTCTTGTTACTGGATGAACCTTTTACCGGCGTAGATGTAAAAAC
TGAAAATGCCATCATCACTTTACTGCGCGAATTACGTGATGAAGGACATTTAGTTTTAGTATCAACACATAACCTGGGAA
CTGTTCCCGAATTTTGCGATCATGTTATTTTGATCAATCGCACAGTACTGGCCAGCGGTCGAACTGAAACTACTTTTACC
CAAAAAAATCTGGAAATCACTTTCGGTGGTGTCTTGCGACACATTAATCTTTCCGGCCCTGAATTGCATGATGATGATGA
CCCTCGTTCATTGACAGTTATTACCGATGACGAACGAGCTGCTGTCTTTTATGGTCATAACCATCACGTTCCCCCGCGGC
AAAGTCAAAAACACAAGGAAAACCAACCATGA

Protein sequence : 
MKRSSLNRQPLFEQPHLVVDNATVTYNNGHTAIYDASFDITGGTICALVGMNGSGKSTLFKTIMGLVTPSQGKVTLNTQS
IKAALKQNIIAYVPQTEEVDWNFPVLVSDVVMMGRYGKMGFLRRPGKRDHQIVGEALERVGLTDLRDRQIGELSGGQKKR
AFLARALAQEGKVLLLDEPFTGVDVKTENAIITLLRELRDEGHLVLVSTHNLGTVPEFCDHVILINRTVLASGRTETTFT
QKNLEITFGGVLRHINLSGPELHDDDDPRSLTVITDDERAAVFYGHNHHVPPRQSQKHKENQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-82 67
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-82 67
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-82 67
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-82 66
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-82 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_1822 YP_003712066.1 Chelated iron transport system membrane protein yfeB BAC0440 Protein 3e-114 79
XNC1_1822 YP_003712066.1 Chelated iron transport system membrane protein yfeB BAC0350 Protein 9e-83 67
XNC1_1822 YP_003712066.1 Chelated iron transport system membrane protein yfeB BAC0400 Protein 6e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XNC1_1822 YP_003712066.1 Chelated iron transport system membrane protein yfeB VFG0526 Protein 9e-83 67