Gene Information

Name : XNC1_1783 (XNC1_1783)
Accession : YP_003712029.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 1722894 - 1724438 bp
Length : 1545 bp
Strand : -
Note : -

DNA sequence :
ATGCCAACACCGACTATCACTATGAGAAAACTGAAAGAAATACTGCGCCTAAAATACGGTGCCGGACTCAGCCACCGCCA
GATTGCGCGCAGCCTGGTTATCTCGCCTTCCGTCGTTTCACGCTATGCCAACCGGGCCGCTCAGCTGGGGCTGGTTCAAT
GGCCGTTACCCCCACACTGGGATGATGCGACGCTCAAACGGGCCTTCTTAAACACTCGGGTTCAGCTCAGAAAGCACACC
CTGCCGGATTGGGCTGAAGTGCACAAAGCGCTGGCGGCTAAAACCGTGACGCTGCAACTCCTGTGGGAAGAGTATACCCA
ACGCCATCCGGGCGGGCATTACAGCTATAACCACTACTGTCGCTTGTATAAAGCCTGGGCGAAAACCACCGCGCCCTCTA
TGCGTCAGCCGCATCAGGCCGGTGAGAAATTATTTATCGATTACTGCGGTCCCACGCTGCCGGTCATTAACCCGGACACC
GGCGAAGCCCGTAAGGCTCAGGTCTTTGTCGCCACCCTCGGGGCATCCAGTTATACCTATGCGGAAGCCACCTGGAGCCA
GACGCTGGAAGACTGGGTCATGAGCCATGTCCGTTGTTTTCAGTATTTGGGCGGGACGCCTGCCCTGGTCGTGCCGGACA
ACCTGAAAAGCAGTACCGCCCGGGCCTGCCGTTATGATCCGGATATCAATCCGACTTACCAGCAGATGCTGGCGCACTAT
CAGGTGGCGGTGATGCCCGCCCGCCCCGCCAAACCCCGGGACAAGGCCAAAGTGGAATCGGCCGTGCAGGTGGTTGAACG
CTGGATCATGGGGAAACTCCGCCATGAAACCTTCTTCAGCCTGGCGTCTCTCAACCAGCGTATCGCACAATTATTGGCAG
GACTGAATCAGAAACCGATGCAAAAGCTCAACGCGTCCCGCAGGACGTTGTTTGAACAACTGGATAAACCGGCGCTCAAC
CCGTTACCCCGGCAGCCTTATCTTTATACCCAGGTGAAAAAGGTTCGGGTTCACCCCGACTATCATGTGGAAGTGGAAAA
ACATTATTACTCCGTACCTTATCAACTGCTGAGAACCGTATTAGAAGCCCATGTCAGCCGTGAACAGGTGACTCTGTACC
ACCAGGGGACTGTCGTGGCGGTGCATCCCCGGCGACATCAATGTGGCTACAGTACCCAGGAGAAGCACATGCCGCCCGCC
CATCAGCATCATGCCCAATGGACGCCGGAACGCTTACTCGAATGGGCCACCCTGGCCGGAGAACATGTCAAAACCTACGT
GACGCATATCCTGGCCACCCGTCAGCATCCCGAGCAGGGGTATCGTTATGTGCTCGGCGTGATGGGACTGCATAAAAGCT
ATGGCTATGAACGTCTTAACAACGCCTGCCACCGAGCTCTGGCGATGGGGATTTACCGGTTGAAAGGCCTGAAATCCATC
CTTGATAAAGGGCTGGATAAACAACCGGTTCCCGCTCGCCATACCGTTGATCCGCTGGCTGACCTTGAGCACACTAACGT
GCGCGGCAGTCATTATTACCATTAA

Protein sequence :
MPTPTITMRKLKEILRLKYGAGLSHRQIARSLVISPSVVSRYANRAAQLGLVQWPLPPHWDDATLKRAFLNTRVQLRKHT
LPDWAEVHKALAAKTVTLQLLWEEYTQRHPGGHYSYNHYCRLYKAWAKTTAPSMRQPHQAGEKLFIDYCGPTLPVINPDT
GEARKAQVFVATLGASSYTYAEATWSQTLEDWVMSHVRCFQYLGGTPALVVPDNLKSSTARACRYDPDINPTYQQMLAHY
QVAVMPARPAKPRDKAKVESAVQVVERWIMGKLRHETFFSLASLNQRIAQLLAGLNQKPMQKLNASRRTLFEQLDKPALN
PLPRQPYLYTQVKKVRVHPDYHVEVEKHYYSVPYQLLRTVLEAHVSREQVTLYHQGTVVAVHPRRHQCGYSTQEKHMPPA
HQHHAQWTPERLLEWATLAGEHVKTYVTHILATRQHPEQGYRYVLGVMGLHKSYGYERLNNACHRALAMGIYRLKGLKSI
LDKGLDKQPVPARHTVDPLADLEHTNVRGSHYYH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 0.0 70
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 1e-180 70
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 0.0 70
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 7e-113 46