Gene Information

Name : fimC (XNC1_1734)
Accession : YP_003711980.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : periplasmic chaperone protein with PapD-like and periplasmic chaperone C-domains
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1636143 - 1636850 bp
Length : 708 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pc : carrier

DNA sequence : 
ATGTTAAAACGTTTTTTGATCGTGCTGTTACTGTCCCTGCCTGTTATTTTCGTTTCCCCCGTTTATGCTGGCGTGGCGCT
CGGTAGTACCCGGGTCATTTATGAAGCTTCTCAGCGTGAAGCGACTATTTCCGTCATTAATTCTGGCAAGGAAGATGTTT
ACCTTATTCAGTCTTGGGTCGATATGTTTACACCAACGACAGAAGCATCTGATCGTAAAGCACCATTTTTAGTCACACCG
CCTTTATTTCGTCTGGATGGTGAACAAGAAAACCGCCTGCGAATTATTCTGACAAATGACGCCTTACCACGGGATCGTGA
ATCTGTCTTCTGGCTGAACGTTAAAGCCATTCCTGCTGTGGAAAAGAATAATGCAAATCGTCTGCTGATATCGGTGAAAA
ACCGGATAAAACTCTTTTATCGACCTGCTGGCGCTGGTTTAACAGAAGAACAGGCGGGTCATGCCTATCAGCAGCTGACT
TTTTCCCGACAGGGCGGGCAACTGGTGGTGCAGAATCCAACTCCTTTTTATATTTCATTCTATGACATTATGATCGACGG
ACAATCTGTACCAGAAACCGGTATGGTATCCCCGTTTAGCAGCAAACAATGGCCTTTACCCGCCGGTTCCGGCAATACCG
TGATCTGGCGGGCCATCAATGATTTTGGCGGTACAACTGAGCCACAGTCTCAGACACTATCATCTTAG

Protein sequence : 
MLKRFLIVLLLSLPVIFVSPVYAGVALGSTRVIYEASQREATISVINSGKEDVYLIQSWVDMFTPTTEASDRKAPFLVTP
PLFRLDGEQENRLRIILTNDALPRDRESVFWLNVKAIPAVEKNNANRLLISVKNRIKLFYRPAGAGLTEEQAGHAYQQLT
FSRQGGQLVVQNPTPFYISFYDIMIDGQSVPETGMVSPFSSKQWPLPAGSGNTVIWRAINDFGGTTEPQSQTLSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lpfB YP_006098366.1 fimbrial chaperone protein Not tested Tn2411 Protein 1e-39 46
phfC AAO17171.1 PhfC Virulence tcd island Protein 1e-43 45
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-40 43
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 8e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimC YP_003711980.1 periplasmic chaperone protein with PapD-like and periplasmic chaperone C-domains VFG1644 Protein 5e-36 41
fimC YP_003711980.1 periplasmic chaperone protein with PapD-like and periplasmic chaperone C-domains VFG0911 Protein 4e-36 41