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Name : kdsB (XNC1_1571) Accession : YP_003711832.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Virulence Product : CTP:CMP-3-deoxy-D-manno-octulosonate transferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1460448 - 1461197 bp Length : 750 bp Strand : + Note : - DNA sequence : ATGTTTACTGTCATCATTCCAGCGCGTTTTGCTTCAACGCGTCTGCCAGGCAAACCACTGGCAGATATTCACGGTAAGCC AATGATTGTACGCGTTATGGAGCGGGCCGTCCGTTCTGGCGCTAATCGGGTTATTGTGGCGACAGATAATCAAAACGTTT TTGATGCAGTGATTGCCGCAGGTGGTGAAGTTTGCATGACAAGTGAAAACCATCATTCAGGTACAGAACGTTTAGCTGAA GTTATCGATAAATACCAATTTTCTGATGATGAAATTATCGTAAATGTTCAAGGTGATGAGCCCCTCATTCCAGAACAAAT TATCAAGCAGGTAGCTGATAATCTGGCTGGCAGTGATGCAGGAATGGCAACGCTTGCAGTACAAATCCAAGATGCAGAAG AAGCATTTAATCCTAATGCAGTCAAAGTCGTTATGGATGCGAAAGGCTATGCGCTTTATTTCTCCCGTGCGCCCATTCCG TGGGAGCGAGATCGCTTTATGCAATCAAAAGAGATGATTGGAGATAACTTCCTGCGTCATATCGGAATTTATGCGTATCG TGCCGGATTTATCCGCCGCTATGTAAAATGGGCACCAGGTCCATTGGAAAATATTGAGATGCTCGAACAACTGCGTGTGC TTTGGTATGGTGAAAAAATCCATGTGGCAAAAGCACTGCAAGCGCCCGGAGCTGGTGTTGATACACCAGAAGATTTGGAA GTTGTCAGAAAAGTTTTCGTAGAGATTTGA Protein sequence : MFTVIIPARFASTRLPGKPLADIHGKPMIVRVMERAVRSGANRVIVATDNQNVFDAVIAAGGEVCMTSENHHSGTERLAE VIDKYQFSDDEIIVNVQGDEPLIPEQIIKQVADNLAGSDAGMATLAVQIQDAEEAFNPNAVKVVMDAKGYALYFSRAPIP WERDRFMQSKEMIGDNFLRHIGIYAYRAGFIRRYVKWAPGPLENIEMLEQLRVLWYGEKIHVAKALQAPGAGVDTPEDLE VVRKVFVEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 6e-35 | 44 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 5e-35 | 44 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 3e-35 | 43 |
