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Name : clpB (XNC1_1283) Accession : YP_003711559.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Virulence Product : ATP-dependent protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1148059 - 1150632 bp Length : 2574 bp Strand : + Note : - DNA sequence : ATGCGTCGGGATCGTTTTACCAATAAATTCCAGCTAGCTCTCGCTGACGCCCAATCCTTTGCATTAGGGCGTGATAATCA ATTCATCGAACCTATCCACTTGATGTCCGCATTGCTCAATCAAGAAGGCGGCTCTATTCGGCCTTTATTGACATCGGCAG GAGTGGATACAAGTCGTTTCAATAATCAACTTAACCTCGCTTTAGATCGATTGCCGAAAGTAGAAGGCAATGGTGGGGAT GTACAAGTATCCAACGAACTAGGCCGTTATTTAAACCTATGTGACAAACTTGCTCAAAAAGCAGGGGATAGCTTTATTTC CTCTGAACTTTTTGTGCTGGCTGCGTTGGAAGAACGTGGAACATTAAGTGATCTCCTGAAATCTGTAAGTGCAACTAAAG ATAAAATCACTAAGGCAATAGAACAGATGCGTGGTGGTGAGAAAGTGAATGACCAAAGTGCGGAAGATCAGCGCCAAGCG TTAAAGAAATACACTATTGATCTGACTGAACGTGCCGAACAAGGTAAGTTGGATCCCGTTATTGGACGCGATGAGGAAAT TCGCCGCACAATTCAGGTATTGCAGCGCAGAACTAAAAATAACCCTGTGCTTATTGGCGAGCCAGGAGTGGGGAAAACAG CCATTGTTGAAGGTTTGGCACAGCGTATTGTCAATGGTGAAGTTCCTGAAGGGCTGAAAAACAAACGTGTTTTGTCTCTT GATATGGGAGCACTGTTGGCTGGTGCAAAATATCGTGGTGAATTTGAGGAACGCCTGAAAGGTGTCCTGAATGATCTGGC TAAACAAGAAGGTTCCATCATCTTGTTTATTGATGAATTACATACGATGGTTGGTGCTGGCAAAGCTGAAGGCGCTATGG ATGCCGGTAACATGCTAAAACCTGCTTTGGCACGTGGTGAATTGCACTGCGTTGGTGCGACGACATTGGATGAATATCGT CAATACATTGAAAAAGATGCAGCCTTAGAACGCCGTTTCCAGAAAGTTTATGTCGCAGAACCTACAGTTGAAGATACTAT CGCGATCTTGCGTGGACTGAAAGAGCGCTATGAATTACATCATCATGTCCAAATTACCGATCCGGCAATCGTTGCAGCCG CAACATTGTCTCACCGTTATATCTCAGATCGTATGTTACCGGACAAAGCGATTGATCTGATTGATGAAGCCGGAGCAAGT CTGCGTATGCAGATGGATTCTAAGCCAGAGGCATTGGATCGTCTGGAACGCCGCGTTATTCAATTAAAACTTGAGCAGCA GGCACTGAAAAAAGAATCTGATGATGCCAGTAAAAAACGTTTAGAAATGTTAAATGCCGAATTAACAGAAAAAGAGCGTG AATACTCTGAATTAGAAGAAGAGTGGAAAGCAGAAAAAGCAGAACTTAGCGGTACTCAGAATATTAAAGCAGAATTAGAA AATGCCCGTATCGAATTAGAAAGAGCACGTCGTAGTGGTGATTTAGCTAAAATGTCTGAAATTCAGTATGGGAAAATACC TGAGTTGGAAAAGCGTTTGGCAACAGCAACAGCGTCTGAAAATCACCATATGAAATTGCTGCGCAACAAAGTCACTGATT CTGAAATTGCTGAAATACTTGCTCGTTGGACAGGAATTCCGGTATCCAGAATGTTGGAAAGTGAAAAAGACAAATTGTTG CGCATGGAACAAGAGTTACATAAACGCGTGATCGGGCAGAACGAGGCGGTGGATGCGGTATCAAATGCAATTCGCCGTAG CAGAGCTGGATTATCTGATCCTAACCGTCCAATTGGCTCCTTCATGTTTTTGGGACCAACAGGTGTGGGTAAAACAGAGC TGTGCAAAGCGTTGGCTAATTTCTTATTCGACAGCGATGATGCGATGGTGCGTATCGATATGTCGGAATTTATGGAAAAA CATTCTGTTTCAAGACTCGTGGGCGCTCCTCCGGGATATGTTGGATATGAAGAAGGTGGATATCTGACAGAAGCAGTGCG CCGTCGTCCTTATTCAGTCATTTTGCTCGATGAAGTAGAAAAAGCCCATCCAGATGTTTTCAATATATTGTTGCAAGTAT TGGATGATGGTCGTTTGACAGACGGTCAGGGAAGAACGATTGATTTCCGTAATACAGTTGTGATTATGACCTCTAACTTA GGTTCTGATATGATTCAGGAACGTTTTGGTTCGCTGGATTATGCAGGAATGAAAGATATGGTGATGGAAGTTGTTGGTCA TCACTTCAGACCTGAGTTTATTAATCGTATTGATGAAATCGTCGTGTTCCATCCATTAGGAAAAGAGCACTTGGTATCTA TTGCGAATATTCAATTGCAGCGTTTATATCAGCGCTTGGAAGAGCGAGGTTATCAGGTTGTGATGACACCTTCTGCATTG GATAAATTGAGTGAAGCAGGTTTTGATCCTGTATATGGTGCCCGTCCTTTGAAAAGAGCGATTCAACAAGAGATTGAAAA TCCTCTGGCCCAACAGATTCTCTCTGGCAAATTGATTCCGGGTGAATTGGTAACTTTGGATTTGGAAAACAACCATATTA TTGCAAGACAATGA Protein sequence : MRRDRFTNKFQLALADAQSFALGRDNQFIEPIHLMSALLNQEGGSIRPLLTSAGVDTSRFNNQLNLALDRLPKVEGNGGD VQVSNELGRYLNLCDKLAQKAGDSFISSELFVLAALEERGTLSDLLKSVSATKDKITKAIEQMRGGEKVNDQSAEDQRQA LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL DMGALLAGAKYRGEFEERLKGVLNDLAKQEGSIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRMLPDKAIDLIDEAGAS LRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKKRLEMLNAELTEKEREYSELEEEWKAEKAELSGTQNIKAELE NARIELERARRSGDLAKMSEIQYGKIPELEKRLATATASENHHMKLLRNKVTDSEIAEILARWTGIPVSRMLESEKDKLL RMEQELHKRVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEK HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTIDFRNTVVIMTSNL GSDMIQERFGSLDYAGMKDMVMEVVGHHFRPEFINRIDEIVVFHPLGKEHLVSIANIQLQRLYQRLEERGYQVVMTPSAL DKLSEAGFDPVYGARPLKRAIQQEIENPLAQQILSGKLIPGELVTLDLENNHIIARQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-165 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003711559.1 | ATP-dependent protease | VFG2084 | Protein | 2e-105 | 42 |
