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Name : lysS (XNC1_1138) Accession : YP_003711414.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Virulence Product : lysine tRNA synthetase, constitutive Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1015118 - 1016632 bp Length : 1515 bp Strand : + Note : - DNA sequence : ATGTCACAACAACAGCAGGGAGCTGAACAGGCTCCTGACTTAAATAACGAACTGAAAACCCGCCGTGAAAAACTGGCTAC TTTGCGTGATAACGGCATTGCTTTCCCAAATGATTTTCGTCGTGAAAACATTTCTGAAGATCTGCACGCAAAATACGATG ATAAGACCAAGGAAGAGTTGGAAGAGCTGGGCATTGAAGTAACCGTCGCAGGTCGCATGATGACCCGCCGCATCATGGGT AAAGCCTCCTTTGCAACCTTGCAGGACATGGGGGGGCGCATTCAGATTTACGTTTCCCGTGATGACCTGCCGGAAGGCAT TTATAACACTCAGTTCAAAAAATGGGATTTGGGTGACATTTTGGGTGCCCGCGGTAAGCTGTTTAAAACGCAAACAGGTG AACTTTCCATCCACTGTACTGAACTGCGTTTGCTGACAAAAGCACTGCGTCCACTGCCGGATAAATTCCACGGTCTGGCG GATCAAGAAACTCGCTATCGTCAGCGTTATCTGGATCTGATCTCGAATGATGAATCCCGTAAAGCATTCCAGATCCGCTC CCGTGTGATGTCTGCACTGCGTAACTTCATGACCAGCAAAGACTTCATGGAAGTTGAAACGCCAATGATGCAGGCAATCC CGGGTGGTGCAAGTGCGCGTCCATTCATCACTCATCACAATGCGCTGGACATCGACATGTACCTGCGTATTGCGCCGGAA CTGTATCTGAAACGTCTGGTTGTTGGTGGTTTCGAGCGCGTTTTCGAAATTAACCGTAACTTCCGTAATGAAGGTATTTC ACCACGTCATAACCCAGAGTTCACTATGATGGAACTCTACATGGCTTATGCTGATTACCAAGATCTGATTGTATTGACTG AAGAACTGTTCCGTACTCTGACTCAGGAAGTTCTGGGAACAACATTGGTGCAATACGGTGAACAAGAATTTGATTTCGGT AAACCTTTCACCAAAATGACCATGAAAGAAGCGATTTGTAAATATCGTCCAGAAACCAATATGGCTGATCTGGATGATAT GGATAAAGCTGTTGCTATCGCTGAATCATTGGGCATTGAAGTTGAGAAAGGTTGGGGACTGGGTCGTGTGCAGTGTGAAA TCTTTGAAGAAACGGCAGAAAGCCACCTGATTCAGCCGACATTCATTACAGCATATCCGGCGGAAGTTTCTCCTCTGGCA CGCCGTAATGACGACAACCCATTCATTACTGATCGTTTTGAATTCTTCATTGGCGGCCGTGAAATTGGTAACGGTTTCTC GGAGCTGAACGACGCAGAAGATCAGGCTGAACGTTTTGCAGAGCAAGTTCGCCAGAAAGATGACGGTGACGACGAAGCGA TGTTCTACGACGAAGATTACATCACTGCGCTGGAGCATGGTTTGCCGCCAACAGCAGGTTTAGGTATTGGTATCGACCGT ATGGTAATGTTGTTCACTAACAGCCATACCATCCGTGACGTCATCCTGTTCCCGGCAATGCGCCCGAACAAATAA Protein sequence : MSQQQQGAEQAPDLNNELKTRREKLATLRDNGIAFPNDFRRENISEDLHAKYDDKTKEELEELGIEVTVAGRMMTRRIMG KASFATLQDMGGRIQIYVSRDDLPEGIYNTQFKKWDLGDILGARGKLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLA DQETRYRQRYLDLISNDESRKAFQIRSRVMSALRNFMTSKDFMEVETPMMQAIPGGASARPFITHHNALDIDMYLRIAPE LYLKRLVVGGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYQDLIVLTEELFRTLTQEVLGTTLVQYGEQEFDFG KPFTKMTMKEAICKYRPETNMADLDDMDKAVAIAESLGIEVEKGWGLGRVQCEIFEETAESHLIQPTFITAYPAEVSPLA RRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAERFAEQVRQKDDGDDEAMFYDEDYITALEHGLPPTAGLGIGIDR MVMLFTNSHTIRDVILFPAMRPNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-171 | 68 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-92 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003711414.1 | lysine tRNA synthetase, constitutive | VFG1668 | Protein | 8e-172 | 68 |
