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Name : hofB (XNC1_1075) Accession : YP_003711355.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Virulence Product : integral membrane protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 951614 - 953119 bp Length : 1506 bp Strand : - Note : - DNA sequence : ATGGTAAACAAGGAAAATCTGTTAATGGAAAGAGAGATAGTAGATCTGTGTCAACAGCATCAGGTTATTATCCTAAAAAA AGACCACCATACTATTACTATTGCTTGTAGTAAATCCCCTAACGAAGATTTCATAGCTGCATTGCGTTTTGTTTCTGGTT TGATTGTAAATATAAATATTTGGCCACAGGCAAAAATAGAATCTATGATGGAACAGGGATCACTTCAGACATCAAAGGAA ATTTACTGTGCAGAAAGTAATGATATGCAACCCTACCATATAGAAAAACAGAATACTAACTATCTCAATCATCATACAAT AGAAACTAATAATATCCGCGATGAAGATATAGATACGCCTGTTATTCAATTAATTAATCAAGCGATATTAACTGCAATAC AAAAAAGAGCCTCAGACATTCACTTTGAACCTTCCCAATATAGTTATCAAATACGTATTCGGGTAGATGGAATACTACAT ATTATGCAGACTCCGCCACCTCAAATGAATGCAAGTATTCCTGCACGCTTGAAAATCATGGCAAAACTCAATATTGCTGA AAAACGTCTGCCGCAAGATGGGCAATTTGACTGGAATGACAATCAGAATAACTATGCAATACGTATATCTACACTACCAA CATTACATGGGGAGAAGGTCGTTTTACGTATTTTAAATACTATACACCAACTATCCCTGGAACAACTCGGCCTGTCTGAA TCACAATTACAACTTTTAAAACAGAAGATCAATCTACCACAGGGCATAATTTTAGTCACCGGCCCAACAGGCAGTGGAAA AACGGTTACTCTCTACAGTTGTCTGCAATATTTAAATCAAGCCAAAAAGAATATCTGTAGTGTTGAAGATCCTGTAGAAA TTCCTTTGAATGGCATTAACCAAACACCTGTGAATAACAAAATTGGACTCGATTTTGCCAAAATCCTTAGAGCATTATTA CGTCAAGATCCCGATATCATCATGGTTGGCGAGATCCGTGACAATGAAACGGCTGAGATATCCATGAAAGCGGCGCAAAC AGGCCACTTGGTTTTATCAACACTGCATACTAACTCGACTATTGATACCTTATCCCGTCTGCAAAATTTGGGAATTTCTA ATTATATCACAGCCTCATGTGTGAAATTGGTTATTGCCCAACGATTGGTACGTAAACTTTGTCCTCACTGTCGCCAGCAA GACAGCACACTTACTACTATCCCTAATATTATTAATAATCCACCTTCCATAGCATTAAAGAAGTGGAACGCGGTTGGTTG CGACCACTGTTTTTCTGGTTATTATGGCAGAGCTGCAATCTATGAATTTCTTGAGGTTAACTCCGAACTTCAGCAAGCCC TATTTGAATGTTCAGCTAACAATCTCTCACATTTACTCACCCAACAACTGGATTCAACACTTTTTTCATCAGGGATAAGA TTTGTAGAAAAAGGAATAACTACCCTTGAAGAAATTTACCAGATTACAGGGCATGAAACGGTATGA Protein sequence : MVNKENLLMEREIVDLCQQHQVIILKKDHHTITIACSKSPNEDFIAALRFVSGLIVNINIWPQAKIESMMEQGSLQTSKE IYCAESNDMQPYHIEKQNTNYLNHHTIETNNIRDEDIDTPVIQLINQAILTAIQKRASDIHFEPSQYSYQIRIRVDGILH IMQTPPPQMNASIPARLKIMAKLNIAEKRLPQDGQFDWNDNQNNYAIRISTLPTLHGEKVVLRILNTIHQLSLEQLGLSE SQLQLLKQKINLPQGIILVTGPTGSGKTVTLYSCLQYLNQAKKNICSVEDPVEIPLNGINQTPVNNKIGLDFAKILRALL RQDPDIIMVGEIRDNETAEISMKAAQTGHLVLSTLHTNSTIDTLSRLQNLGISNYITASCVKLVIAQRLVRKLCPHCRQQ DSTLTTIPNIINNPPSIALKKWNAVGCDHCFSGYYGRAAIYEFLEVNSELQQALFECSANNLSHLLTQQLDSTLFSSGIR FVEKGITTLEEIYQITGHETV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-66 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-66 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hofB | YP_003711355.1 | integral membrane protein | VFG1876 | Protein | 7e-66 | 46 |
| hofB | YP_003711355.1 | integral membrane protein | VFG0182 | Protein | 3e-67 | 43 |
| hofB | YP_003711355.1 | integral membrane protein | VFG1880 | Protein | 1e-82 | 42 |
| hofB | YP_003711355.1 | integral membrane protein | VFG2048 | Protein | 4e-68 | 42 |
| hofB | YP_003711355.1 | integral membrane protein | VFG2426 | Protein | 1e-70 | 41 |
