Gene Information

Name : aldB (XNC1_0875)
Accession : YP_003711164.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.22
Position : 743586 - 745070 bp
Length : 1485 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAGCTACAAGATATTGCCAAAGAACTATTACCTGCTAAATCTTATAAGATGTTGATTAATGGTGAGTGGGTCGA
TAGCGTTTCCAAAAATACGCTAAAAAGCTATAACCCTGCAACAGGTGAACTACTGACGGAATATGCAGCAGGTAACACAG
ACGATGTCGAGCTTGCTGTTAAAGCAGCCCGAAAAGCCTTGCCGGAATGGAGCAAGACTTCCCCTGTAGAAAGACAATCT
CTGTTACTGAAAATTGCCGATCTGCTGGAAGCTGAAGCAGAACGTTTTATCATTCTTGAAACATTGGATGGTGGTAAGAC
TCAGACTTTATGTCGTTACTTTGATATTCCTTTCTCCGTTGATCATTTCCGTTATTTTGCAGGCGTCATTCGTGCTCATT
CTGATGCTACTGATGTTATCGATAACGATACGCTCAGCCTAGTGATCAGAGAACCCATCGGGGTCGTCGGGCAGATTATT
CCATGGAACTTCCCATTATTGATGGCCGTCTGGAAAATAGCTCCTGCGCTTGCCGCTGGTAACACCATCATCATCAATCC
CGCAAGCCTGACACCAATCACTCTGCTTGAATTGGGACGTATCTTAAATCAGGTTCTGCCACCGGGCGTTGTCAATATCG
TTACGGGACGTGGTTCAATTGTAGGTCAGGCTATCCTCGACCATAAAGGTATTGACAAAGTAGCCTTTACCGGATCAACA
GAAATCGGTTACAACGTTGCAGCAGCAGCGGCGAAAAGGCTTATTCCTGCAACTCTGGAATTGGGAGGAAAATCTGCCAA
TATTGTATTCCCTGATGCCAATATGAAGAAAGCGGTCAAATATGCCGCCAACGCAATTTTGCTGAATCAAGGACAAGCCT
GTGAATCTGGTGCCCGCCTGTTCCTGCATAAAGATATTTATAATGAATTTCTGACATCGCTGAAAATGGTATTTGAGTCA
GTCAAAGTGGGTGATCCCATGCTGATGGAAACCGAAATGGGTAGCCAGGTCAGTGAAGAACAAATGAATACCATTTTGGG
TTACATTGATCTGGCCAAAAAAGAAGGAGCAAGCATACTGACGGGCGGAAACCGCATAACAGGTGCAGGATACGATGATG
GTTTCTTTATCCAGCCCACGATTATCACGAATGTGACCAATACAATGCGGGTTGCACAGGAAGAGATTTTCGGGCCGGTG
CTGTGCGTTATTCCATTCAGTACGGAAGAAGAAGTCATTGATATGGCCAATGACTCTGAATATGGTCTGGCCGGTGCTGT
ATGGACACAGGATATTAACCGTGCCCTGCGCGTTGCCAAAGCAGTAAGAACGGGTCGCATGTGGATTAATACTTATCACG
AACTGCCCGCCCATGCTCCTTTCGGGGGTTATAAGAAATCGGGGCTTGGGCGTGAAACCCACAAAATGATACTGGATGCT
TATTCTGAAGTGAAAAATATCTATATCAGTACCAAAGAAGATTAA

Protein sequence :
MKKLQDIAKELLPAKSYKMLINGEWVDSVSKNTLKSYNPATGELLTEYAAGNTDDVELAVKAARKALPEWSKTSPVERQS
LLLKIADLLEAEAERFIILETLDGGKTQTLCRYFDIPFSVDHFRYFAGVIRAHSDATDVIDNDTLSLVIREPIGVVGQII
PWNFPLLMAVWKIAPALAAGNTIIINPASLTPITLLELGRILNQVLPPGVVNIVTGRGSIVGQAILDHKGIDKVAFTGST
EIGYNVAAAAAKRLIPATLELGGKSANIVFPDANMKKAVKYAANAILLNQGQACESGARLFLHKDIYNEFLTSLKMVFES
VKVGDPMLMETEMGSQVSEEQMNTILGYIDLAKKEGASILTGGNRITGAGYDDGFFIQPTIITNVTNTMRVAQEEIFGPV
LCVIPFSTEEEVIDMANDSEYGLAGAVWTQDINRALRVAKAVRTGRMWINTYHELPAHAPFGGYKKSGLGRETHKMILDA
YSEVKNIYISTKED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-100 48
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-103 47
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-103 47
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-103 47
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-102 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldB YP_003711164.1 aldehyde dehydrogenase VFG0082 Protein 2e-100 48