Gene Information

Name : XNC1_0829 (XNC1_0829)
Accession : YP_003711122.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Unknown
Product : DNA-binding prophage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 712283 - 713152 bp
Length : 870 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h : extrachromosomal origin

DNA sequence :
ATGAGTCGATTGATTAAGGAATTAAAGTTTTTTGCCCGTCAGGGTGGTGGCAGCCATAAAACCTGTCATGACCACATTCG
GATTGCAGGGCGTTTAGGTGCGTTGTTATTGAGCCTGAATATTCAGGTTAAAAGTCTCAGCCATTTGAAAGCCAAGCATG
TAGAACATTACGTTGATACCCGTTTATCTCAGGGTGTTGCTAAACGAACGGTGCAGAATGAAATGTCCGCGCTACGCAAT
ATTTTCCGCATGGCAGGCAGGGAGAAACTGGAAACTTCTCCGCGTTTGAGTAATCAGGCATTGGGATTAAGTGGAGCCAG
TCGCGCGGGAACAAAGCAGGCGATCCCTGATACCACATTTCAGGCTGTTTATCAGAAGGCACTGGAACGTGATGCCGGAT
TTTCGGCCACACTGAAACTTGCCCGATTGATGGGGTTACGTTCTCAGGAAGCGGTGCAGTGTAGTGCTTCATTGAAAAGC
TGGCGGAAACAATTAGAACAACCAGAGCCAAAATTGCATGTTGTTTTCGGTACAAAAGACGGCAGACCAAGACAAACCCG
CGTATTGAATGTTGCTGCTGTAAAAGAAGCTGTCGATCAGGCCATTGCTATTGCAGAGCAACGAGGCGGCAGGTTGATTG
AAAAACCCGATCTTAAGCAGACCATGAACTATTGGCGGAAACACACCACAAGGATTGGTTTAGTAGGTTGTCACTCTCCT
CATAGCCTGCGCTATGCGTGGGCGCAGGATGCACTGAATTTTTACCAACAGAATGGTTTTAGCCGTCAGGAAGCAAGGGC
GCTGGTTTCAATAGATTTAGGTCATGGTGATGGTCGTGGGCGTTACGTTGAGCGAGTTTATAGCCGTTAA

Protein sequence :
MSRLIKELKFFARQGGGSHKTCHDHIRIAGRLGALLLSLNIQVKSLSHLKAKHVEHYVDTRLSQGVAKRTVQNEMSALRN
IFRMAGREKLETSPRLSNQALGLSGASRAGTKQAIPDTTFQAVYQKALERDAGFSATLKLARLMGLRSQEAVQCSASLKS
WRKQLEQPEPKLHVVFGTKDGRPRQTRVLNVAAVKEAVDQAIAIAEQRGGRLIEKPDLKQTMNYWRKHTTRIGLVGCHSP
HSLRYAWAQDALNFYQQNGFSRQEARALVSIDLGHGDGRGRYVERVYSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 8e-77 55
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 8e-77 55
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 9e-66 50
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 9e-66 50
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 3e-58 48
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 5e-69 47
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 8e-66 47
api85 CAF28559.1 putative integrase Not tested YAPI Protein 1e-41 46