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Name : sctV (wcw_0849) Accession : YP_003709221.1 Strain : Waddlia chondrophila WSU 86-1044 Genome accession: NC_014225 Putative virulence/resistance : Virulence Product : type III secretion inner membrane protein SctV Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 919126 - 921315 bp Length : 2190 bp Strand : - Note : Flagellar biosynthesis pathway, component FlhA DNA sequence : ATGAATTTTATTACCAACATTCTTGATGGTATCACACAGAGATTAGGGGGAGAAAAATCCCTTTCCAATATCTCCAAAGG CAGCGACATCGCACTTGCCCTGCTCATTGTCGGTATTTTGGGAATGATCATTCTTCCAATCGGACCCGATGTGATTGACT ATTTAATCGCTGTCAACCTGTCTGCTTCTGTTGTCCTCTTGATGGTTTCCCTTTACATTCCTAGCGCAGTCCACCTCTCG ATCTTTCCCTCGCTGCTCTTGATCACGACTCTGTACAGGCTCGGCACCAACATCGCCTCAACAAGACAGATCTTGTTGAA CGCCAATGCAGGGGAAATCATCTTCTCTTTCGGTAATTTCGTTGTCGGCGGAAACTTCGTCGTTGGGGGAATCATCTTTA TCATCATCACATTAGTTAACTTCATCGTGATCACCAAAGGTGCCGAACGTGTGGCGGAGGTTGCCGCACGATTCACCTTG GATGCCATGCCTGGTAAACAGATGAGTATCGATGCCGATATGCGAGCGGGAATCCTGGATTCGAATGAAGCGCGTGCAAA ACGTTTGGCAATTCAAAAAGAGTCTCAATTATATGGTGCCATGGACGGTGCGATGAAATTCGTTAAGGGAGATGCTATCG CAGGGATTGTCATTACGCTGATCAACGTTATCGGCGGGATGACCATTGGTATGGCCATCAACGGGATGCCTGCTCAAGAC GCGATTTCTACGTATGCGATCCTCTCAATCGGTGACGGTTTAGTTTCTCAAATCCCGGCACTTTTGATCTCAATCACAGC CGGTATCGTAACCACTCGCGTCAGCAGCGAAAAAGAAGCTAACCTCGGTAAAGAAATTTCCGGGCAACTGTTAAAGCAGC CTAAGGCATTGATGATTGCTGCAGGCTTTTGCATGGGGCTTGCCATCCTTCCAGGTTTCCCAAAAGCTCCTTTTATGATC CTTGCGCTTACCTTCGGAATTATGGGGTATGCCTTATGGTCGGGAGAAGCCGGCCGTGCAGCCGGCGGCAGCAGCGGAGG CGGTGGCGGCGGAGCTATGGCAGGGGGGATCTCCTCGGCAGCTGAAGAGGAGTCTTCGACGATCGAAACAGCTGTTAAAG GGCACAGTGCAATCACTGGAGGCGGTGTCGACTCCTACTCTCTTACGCTTCCGGTTATTTTAGAATGCGGAAATTCTCTT AGTTCTAAAATCCAGAAAGCGCAAAGAGGAAAAAGCTTTATCGACGTGATGATTCCGCGCATGAGGCAAGCCCTATATGC TGATCTTGGAGTCAGGTTTCCAGGCGTCCACGTCCGTACAGATTCTCCCATTCTTGAGCCGGACGAATACTCGATCCATT TGAACGAAGTGCCGATTATTCGCGGAAAAGTATTAGCCGGCCATGTACTGACCAACGAAACAGAAGAGAACCTTAATCGG TACAACCTCTCATTCACTGCGTATAAAAACTCTCTAGGAATGCCCTCATTATGGGTGGAGGATAAAAATAAGCAAATTTT AGAAAAAGCCGGCATCAAATCTTGGGACTCTCTGGAGGTGATGATTTTACACCTCTCCTATTTCTTTCGGCACTATGCCA ACGAATTTGTCGGCATTCAAGAAGCAAAATCGATGTTGGAGTTTATGGAGAAATCCTTTCCCGACCTCGTTAAAGAAGTG ACGCGCTTGATTCCCCTACAGAAAATGACAGACATTTTCAAACGTCTAATTCAGGAGCAGATATCGGTTAAAGATTTAAG AACGATTCTTGAATCTCTCAGCGAATGGGCTCAAACGGAAAAAGACACAGTCCTTTTAACAGAATATGTACGCTCTTCTT TGAAGAGATATATCAGTTATAAATTCTCTCAAGGGCAATCAGTATTGTCGGTCTATATCCTAGATCCTGAAATTGAGGAT ATGGTAAGGGGTGCGATCAAGCAAACCTCTGCCGGATCCTATCTAGCTTTAGACCCCGATTCTGTCCAATTGATTCTTCA AGGGATTCGCAACACTGTCGCTCCCCCGCCGCCGGGAGGACAGGAACCTGTCTTGTTAACAGCAATTGACGTAAGGCGGT TTGTGCGCAAATTGATTGAAATGGAATTTCCTGATGTTTCTGTGGTCTCCTACCAGGAAATCGTTCCGGAAATACGGATA CAACCGTTAGGGAGAATACAACTGTCTTAA Protein sequence : MNFITNILDGITQRLGGEKSLSNISKGSDIALALLIVGILGMIILPIGPDVIDYLIAVNLSASVVLLMVSLYIPSAVHLS IFPSLLLITTLYRLGTNIASTRQILLNANAGEIIFSFGNFVVGGNFVVGGIIFIIITLVNFIVITKGAERVAEVAARFTL DAMPGKQMSIDADMRAGILDSNEARAKRLAIQKESQLYGAMDGAMKFVKGDAIAGIVITLINVIGGMTIGMAINGMPAQD AISTYAILSIGDGLVSQIPALLISITAGIVTTRVSSEKEANLGKEISGQLLKQPKALMIAAGFCMGLAILPGFPKAPFMI LALTFGIMGYALWSGEAGRAAGGSSGGGGGGAMAGGISSAAEEESSTIETAVKGHSAITGGGVDSYSLTLPVILECGNSL SSKIQKAQRGKSFIDVMIPRMRQALYADLGVRFPGVHVRTDSPILEPDEYSIHLNEVPIIRGKVLAGHVLTNETEENLNR YNLSFTAYKNSLGMPSLWVEDKNKQILEKAGIKSWDSLEVMILHLSYFFRHYANEFVGIQEAKSMLEFMEKSFPDLVKEV TRLIPLQKMTDIFKRLIQEQISVKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKRYISYKFSQGQSVLSVYILDPEIED MVRGAIKQTSAGSYLALDPDSVQLILQGIRNTVAPPPPGGQEPVLLTAIDVRRFVRKLIEMEFPDVSVVSYQEIVPEIRI QPLGRIQLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-135 | 47 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 2e-91 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sctV | YP_003709221.1 | type III secretion inner membrane protein SctV | VFG2126 | Protein | 0.0 | 64 |
| sctV | YP_003709221.1 | type III secretion inner membrane protein SctV | VFG0064 | Protein | 3e-137 | 47 |
| sctV | YP_003709221.1 | type III secretion inner membrane protein SctV | VFG0384 | Protein | 6e-135 | 47 |
| sctV | YP_003709221.1 | type III secretion inner membrane protein SctV | VFG0198 | Protein | 1e-132 | 47 |
