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Name : clpB (wcw_0840) Accession : YP_003709212.1 Strain : Waddlia chondrophila WSU 86-1044 Genome accession: NC_014225 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 907704 - 910313 bp Length : 2610 bp Strand : - Note : ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGCTCAGAATTTCACAGATGCAGTCTCAACAGCGATACAAGAAGCGTTTGCAAACGCGCAGTCGCGAAAAAATCCGGA AGTCACGGAAAACCACCTTCTTCTAGCCTTTCTCGAAGATCCGAAAGGGTATTTTCAATCGGTACTTAACAACCTAAATA CTCACCCTTATCAATTGCAATCCCAAGTGAAAGACCTCTTGCAGCAGCTTCCCACTTTCGAAGGAAGCGGCACAGAACCT CCTCAAGTCGCACGCAATCTTCAAGGAAGAATCACTGATGCCGAACAGATCGCAAAGCAATGGCAAGATTCATACATAAG CAGCGACCATTTCCTTCTATCGTTTTGGAAAAATGGAGGCGAACCATTTATCTCTTGGAAAGGGCAGGCAGGAATCTCTT TTAGGCAACTCGAAGAACATATCAAAAAAATGCGTGGAAACCGTCATATAGACTCCCCTGCCGCTGAACAAAGCTTGCAA GCTCTCGACAAATACTGCCGCAATCTGACTAAGCTGGCGCGGGATGGCAAAATGGATCCTGTGATCGGCAGAGATGAAGA GATCAGACGGACAATGCAAGTCCTTAGCCGACGAACCAAGAACAATCCCATGTTGATTGGAGAGCCCGGCGTCGGAAAAA CGGCGATTGCAGAGGGAATGGCTCTTCGGATCATCCAAGGAGATGTCCCCGATTCTCTTAAAGACAAGCAAATATATGCC CTCGACATGGGATCTCTGGTTGCCGGCACAAAATACCGCGGCGAATTTGAAGAGCGGCTAAAAGGAATCCTTGAGGAAGT CGAATCGAATGAAGGCAAAGTGATCTTGTTTATCGATGAAGCGCATACGCTGATCGGTGCCGGAGCGGTCGAAGGGTCAA TGGACGCTGCCAATCTGCTTAAACCTGCCCTAGCTAGAGGAACGCTTCATTGCATCGGCGCCACAACATTGGGAGAGTAT CAAAAACACATAGAGAAAGACCCTGCGCTGGAAAGACGTTTCCAGCCGGTAACGATTCGCGAACCATCTCTTGAAGATTC GATTGCTATTTTGAGAGGGTTAAAAGAGCGTTACGAAATTTTCCACGGTGTAAGGATTACCGAATCCGCTCTTCATGCAG CTGTCTTTCTTTCCTACCGCTATATCACAGACCGAAGACTACCCGACAAAGCGATCGACCTTATTGACGAAGCGGCCAGC ATGATTAGAATGCAAATTGGAAGCCGTCCCCTTCCCATCGACAACAAAGAGAGAGAGCTTTCCAAATTAATCGTTGAACA AGAAGAAGTGCGCAGAGAAAATCCTGAAAGCGAAAATATTGCCAAACTCGAAGAGAAAATCGCTTCGATTAAGGAGGAGC TAAGCGCTTTAAAAGAGCAGTGGGAAGAAGAGAAAAAATTAATTAACAACCTTAAACAAAAGAAAAACGAACTCGAGCAG CTCCGTTTTCAAGAGGAGGAGCTTGAACGAAAGGCTGACTACCAAAAAGTAGCCGAGCTGCGCTATGAAAAAATTCCCGC TCTGAAAAAAGCAATTGAAGAAGCCCAGGAAAAACTTAATGCTAAACCGAACCGTCTGCTTCAAGAAGAGGTTGATGAAC AATTAATCGCTCAAATCGTCTCTAAATGGACGGGAATCCCTGTCAGTAAAATGATGGAAGGAGAAGCGGAAAAACTTTTG CATCTTGAAAAAGAGATTGGCAAACGGGTCATCGGTCAGGAAATGGGTGTGAAAGCAGTTTCCGAAGCGATCCGCCGCTC CCGTTCCGGACTGAGCGATCCCAATCGGCCTATCGGAGCGTTTTTGTTTTTGGGACCGACTGGCGTCGGAAAAACAGAAC TTGCAAAATCTCTTGCAGAACAGCTATTCGATCAAGAAGAGGCCATGATCCGCCTAGATATGTCTGAATATATGGAAAAA CACGCCGTATCAAAGCTGATCGGCTCTCCTCCAGGCTATGTCGGATATGATGAGGGAGGACAGCTGACAGAAGCTTTGCG CCGCCGCCCCTATACCGTCGTTTTACTAGACGAAGTAGAAAAAGCTCATCACGATGTATTCAACATCCTGCTGCAAATTT TTGATGATGGAAGGCTGACCGATAGCAAAGGAAGAGTTGTTAACTGCAAAAATGCTCTTTTTATCATGACTTCAAATCTC GGATCGGACTTACTGCTTCAACAGATGGAGAAAGATCCCTCTTCAATCACGAAAGAGAGCATTGTCAAATTATTAGAGCC CGTGATCCGACAGCATTTCCGTCCAGAATTCATCAACAGGTTAGATGAAATCCTCCCCTTCTTGCCTCTTCAGCAAAAGG ACATGGAAAAAATTGTCATGATCCAACTCCAACATCTTAAACGACGTATGGCTGACCGGGAGACAAAGCTGACCTGGTCG GATGATGTGGTCAAATTTTTGGCTAACAAAGGCTATGATCCCTCTTTCGGTGCGAGACCTCTGAAAAGACTGATCCAGCA TGAAGTGGTAAATAAGCTGTCGACAGCAATCCTAGAAGGGAAAATTCCCTCTAATAGCACCGTTCACCTAATGTTGGATG GAGACGAAGTTGGATTTATACCGAACAAACTTCAAGAATCGGAATTTTGA Protein sequence : MAQNFTDAVSTAIQEAFANAQSRKNPEVTENHLLLAFLEDPKGYFQSVLNNLNTHPYQLQSQVKDLLQQLPTFEGSGTEP PQVARNLQGRITDAEQIAKQWQDSYISSDHFLLSFWKNGGEPFISWKGQAGISFRQLEEHIKKMRGNRHIDSPAAEQSLQ ALDKYCRNLTKLARDGKMDPVIGRDEEIRRTMQVLSRRTKNNPMLIGEPGVGKTAIAEGMALRIIQGDVPDSLKDKQIYA LDMGSLVAGTKYRGEFEERLKGILEEVESNEGKVILFIDEAHTLIGAGAVEGSMDAANLLKPALARGTLHCIGATTLGEY QKHIEKDPALERRFQPVTIREPSLEDSIAILRGLKERYEIFHGVRITESALHAAVFLSYRYITDRRLPDKAIDLIDEAAS MIRMQIGSRPLPIDNKERELSKLIVEQEEVRRENPESENIAKLEEKIASIKEELSALKEQWEEEKKLINNLKQKKNELEQ LRFQEEELERKADYQKVAELRYEKIPALKKAIEEAQEKLNAKPNRLLQEEVDEQLIAQIVSKWTGIPVSKMMEGEAEKLL HLEKEIGKRVIGQEMGVKAVSEAIRRSRSGLSDPNRPIGAFLFLGPTGVGKTELAKSLAEQLFDQEEAMIRLDMSEYMEK HAVSKLIGSPPGYVGYDEGGQLTEALRRRPYTVVLLDEVEKAHHDVFNILLQIFDDGRLTDSKGRVVNCKNALFIMTSNL GSDLLLQQMEKDPSSITKESIVKLLEPVIRQHFRPEFINRLDEILPFLPLQQKDMEKIVMIQLQHLKRRMADRETKLTWS DDVVKFLANKGYDPSFGARPLKRLIQHEVVNKLSTAILEGKIPSNSTVHLMLDGDEVGFIPNKLQESEF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-140 | 45 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-112 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003709212.1 | ATP-dependent Clp protease, ATP-binding subunit ClpB | VFG2076 | Protein | 5e-120 | 43 |
