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Name : clpC (wcw_0242) Accession : YP_003708623.1 Strain : Waddlia chondrophila WSU 86-1044 Genome accession: NC_014225 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit clpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 265060 - 267675 bp Length : 2616 bp Strand : + Note : ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGTTTGATAAATTCACTAACCGTGCAAAGCAGGTGATCAAGCTTGCGAAGAAAGAAGCGCAGAGGCTAAATCACAATTA CTTAGGTACAGAGCACGTTCTGTTAGGATTGCTAAAGTTGGGACAGGGTGTCGCTGTCAATGTCCTCCGCAATTTGAACA TCGATTTTGAAACTGTGCGCAGTGAAGTGGAGAAGTTGGTTGGTTTCGGCCCCGAGATCCAGGTGTATGGCGATCCGGCT TTAACCGGCAAGGTGAAAAAGGTATTTGAGTATGCCAACGACGAAGCTGCTAATCTGAATCACAACTACGTGGGGACAGA GCATCTGCTTTTAGGCTTGTTGAAACAGACTGATGGCGTTGCCGCGCAAGTTCTGGAAAATCTCAATGTCAACTTGAACG AGGTACGCAAAGAAGTGTTGAAAGAGCTTGAAACGTTCAATTTGCAGTTGCCGCCGATTGGTCAGCAGCCTCCTCCTCCC GGCCAGCAAGGTCAAGGACCTGCCGGAATTGGGCCTGGAGGACGTCCATTCGAAAAAGGGGTAAGTTCTTCAGACAAGAT GCCTGCGTTGAGGGCTTATGGATATGATTTGACGGAGATGACTCGGGAAGGGGAGATGGATCCTGTGATCGGAAGGATCG AAGAAGTTGAACGCTTGATTTTAATTCTCTGCCGCCGAAGAAAAAATAATCCTGTATTGATTGGAGAGGCTGGAGTCGGA AAAACAGCGATTGTGGAAGGATTGGCCCAGGCGATTGTGAGAGGGGATGTACCGGATAACCTGAGGAACAAACGCTTGAT CACCCTTGATTTGGCATTGATGATTGCCGGAACGAAATACCGCGGCCAGTTCGAAGAGCGGATCAAGGCTGTGATGGAAG AGATCCGAAAAAATGGAAATGTTCTGCTCTTTATCGACGAACTTCACACAATCGTGGGAGCAGGTGCTGCGGAGGGGGCG ATCGATGCTTCCAACATCTTAAAGCCGGCGCTTTCCCGAGGGGAAATCCAGTGTATTGGTGCGACAACGATAGACGAATA CCGAAAACATATTGAAAAAGATGCTGCGCTGGAGAGGCGATTTCAAAAAGTGATGGTAGCTCCAGCTTCTGTCGATGAGA CTTATGAGATTCTCAAAGGGTTAAAGGGGAAGTATGAAGAGCATCACAAGTGTGTGTATACGCCGGAATCTTTGAAGGCT GCTGCAGTGTTGTCCGATCGGTATCTTCATGGGCGCTTTCTTCCCGACAAAGCGATCGATCTTTTGGACGAGGCGGGGGC TAAGATGCGCATTTCCATGATGAATCAGCCGCAAGAGATCAATAGGATCGAATCGGATATCGAAGAAGTGAGAATTGCCA AAGAGGAGGCGATCGGCAAGCAGGAGTACGAAAAAGCTGCCGGCCTGCGCGATCAGGAAAAGATGCTGAGAGAGCAGCTG CAGAAGATTCGTGCAGAGTGGGAAGTGAATAAGGAAGAGCATCAGGTTGTCGTCGAAGACGATGATATAGCGGCTGTCGT TGCTCGGCAAACAGGAGTGCCTCTCAATAGGTTGACGGAAGGGGAAACAGAAAAAGTGCTCCATATGGAGGAGTTGCTCA CCCAAGGTTTAGTCGGACAGGATGATGCCGTCAAAACAATTTGCAGAGCGATCAGAAGGAGCCGTGCCCAGATTAAAGAT CCCAACCGGCCAATCGGAGCATTTATGTTTCTCGGCCCTACCGGGGTAGGAAAAACGCTTCTTGCCCGGTTGATTGCTAC GCATCTCTTTGGAGGCGAGGATGCTTTGATCCAGGTGGACATGTCTGAATACATGGAGAAGTTCGCTGTTAGTCGAATGA CCGGATCGCCTCCGGGATATGTTGGTCATGAGGAAGGGGGGCAATTAACCGAGCAGGTGCGCCAGCGTCCTTATTCTGTC GTTTTGTTTGATGAGATTGAAAAAGCGCATCCTGATGTGATGGACCTGCTTCTACAAATTTTAGAGGATGGGCGGCTGAC AGATTCTTTCGGAAGAAAAGTAGATTTTCGCAATACAGTGATCATCATGACCTCGAATCTCGGTGCGGATTTAATCAAAA AGAGCACCGAAGTGGGGTTTGCAGCGACAAACGGAGCAATGGATTACGATCATATCAAAGAGAAGATCGAAGGTGCTGTC CAAAAGCATTTCAAGCCTGAATTCATCAATCGTTTGAATGACATGGTCATTTTCCATCCACTGGATCGAGAACACCTGAT TGAGGTGATCGATCTTGAAATTGCCAAGCTTCAAAAAAGGTTGGAAGAGAGGGAAGTCTTTATTCATCTTGATGAGAGTG CAAAGGATTTTCTTGTGGACAAAGGGTTTCAGCCGGAAATGGGCGCGCGTCCTTTGCGCAGGACAATTGAGCAGTATTTG GAAGATCCATTGGCAGAGATCCTGTTGGCTCATCCTCACGACGGCCGGCGTTGCCTGGTCACCGTTGAGGACAAAGCGCT TAAGTTTGTCGATGAAGAGATCTTTCCTTATTCCAAATCTAAAAAGCACAAGAAAGATCAAAAAGACAAGGGCAACGAAG CGGGATCCGAAGAGGGGAGAAAGCAGGTAGAAGAGTCAGAAGCCGGAAAATCTTAG Protein sequence : MFDKFTNRAKQVIKLAKKEAQRLNHNYLGTEHVLLGLLKLGQGVAVNVLRNLNIDFETVRSEVEKLVGFGPEIQVYGDPA LTGKVKKVFEYANDEAANLNHNYVGTEHLLLGLLKQTDGVAAQVLENLNVNLNEVRKEVLKELETFNLQLPPIGQQPPPP GQQGQGPAGIGPGGRPFEKGVSSSDKMPALRAYGYDLTEMTREGEMDPVIGRIEEVERLILILCRRRKNNPVLIGEAGVG KTAIVEGLAQAIVRGDVPDNLRNKRLITLDLALMIAGTKYRGQFEERIKAVMEEIRKNGNVLLFIDELHTIVGAGAAEGA IDASNILKPALSRGEIQCIGATTIDEYRKHIEKDAALERRFQKVMVAPASVDETYEILKGLKGKYEEHHKCVYTPESLKA AAVLSDRYLHGRFLPDKAIDLLDEAGAKMRISMMNQPQEINRIESDIEEVRIAKEEAIGKQEYEKAAGLRDQEKMLREQL QKIRAEWEVNKEEHQVVVEDDDIAAVVARQTGVPLNRLTEGETEKVLHMEELLTQGLVGQDDAVKTICRAIRRSRAQIKD PNRPIGAFMFLGPTGVGKTLLARLIATHLFGGEDALIQVDMSEYMEKFAVSRMTGSPPGYVGHEEGGQLTEQVRQRPYSV VLFDEIEKAHPDVMDLLLQILEDGRLTDSFGRKVDFRNTVIIMTSNLGADLIKKSTEVGFAATNGAMDYDHIKEKIEGAV QKHFKPEFINRLNDMVIFHPLDREHLIEVIDLEIAKLQKRLEEREVFIHLDESAKDFLVDKGFQPEMGARPLRRTIEQYL EDPLAEILLAHPHDGRRCLVTVEDKALKFVDEEIFPYSKSKKHKKDQKDKGNEAGSEEGRKQVEESEAGKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-178 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003708623.1 | ATP-dependent Clp protease ATP-binding subunit clpC | VFG0079 | Protein | 0.0 | 56 |
| clpC | YP_003708623.1 | ATP-dependent Clp protease ATP-binding subunit clpC | VFG0080 | Protein | 4e-150 | 51 |
