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Name : gspE (wcw_1913) Accession : YP_003710256.1 Strain : Waddlia chondrophila WSU 86-1044 Genome accession: NC_014225 Putative virulence/resistance : Virulence Product : General secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2055144 - 2056769 bp Length : 1626 bp Strand : - Note : Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGGCAGATAATGAGGCATCCGATGAAGATCAGACACTGAGGCGTGTTCTTGGAGGGGAGGATGTCAACCGATCCATGGC AGAGCAATTTGGCATGGAGATCTATGATGACCTTACCGGCTATTATGCCCCAAGTGAAGTTTTCAAAATGCTTCCTTATA GCTTTGTTAAAAAACATACGCTGCTTCCCATCAAGGAAGAAGAAAACCTCATAGTCGTTGCTGTCTCCGATCCTCTCAAT CTCGATCCTTTGGAAGAGATCAGAATGTTGCTTGGGAGAGAAGTCAAAGCCGTGTACAGCCCCCGGGAAATGATCGAGCT TGCCATTGGCGAACGGTACGATGCGGAAACAGGAGCGGCTTCAGAATTTATCGCCTCCTTGGCAAAGGGAAGGGAGGAGG GAAAAGACGACGAAGTTGAAGTGTACGACCTGTTTGATACGTCCAGAGAGCAATCTCCAATCATCAAGCTTCTCAACTTG ATTTTGACAGAAGCGATTCAGCAAGGGGCTTCCGATATCCATTTTGAACCTCAGGAGTCAGGTTTGCGCGTCCGTTATCG AATCGATGGTGTTTTGCAAACCCGCCACTCTCCTTCTCCTGAACTTCAGGCGCAGCTTCTTGCCCGTATCAAGGTGATGG CGAAAATGGATATCGCCGAGCACCGTTTACCGCAAGATGGCAGAATTAAGCTAAGGATGGGAAGGCGTGAAATCGACTTT CGTGTCAGCACAGTCCCCATCACCGGCGGCGAAAGAATTGTTCTCAGGATCTTGGACAAGGGAAATGTGGTGATTGGCCT GTACTCTTTAGGCATGCTGCCGGAGGTTTTTGATGAATTTAAGCGGATGATCAAGCTTCCCGAGGGGATTCTTCTTGTGA CAGGCCCTACGGGAAGTGGTAAAACAACAACTCTTTATAGTGCCATCAATGAAATCTACAGCGATGAAACGAACATCATG ACGATTGAAGACCCTGTCGAATACAACTTGAAAGGGATTGCACAGATCGGAGTCAAACCGAAGATCAACTTAACATTTGC TGCAGGGCTTCGCACAATATTGAGGCAGGATCCCGATGTCGTGATGGTGGGGGAGATCCGAGATCTAGAAACAGCGCAGA TCGCTATTCAAGCATCGCTGACCGGTCATCTTGTCATGAGTACGCTGCATACCAACGATGCCCCTTCTGCGATTACGCGT TTAGTCGATATGGGGATCGAGCCCTACCTTCTCTCTTCGACGATTGTCGGTGTTCTTGCACAGCGCCTCGTCAGACGTAT TTGTCCTGATTGCTCCACTGCCTACAAAGCATCTGATGACGAAATCAAGTCGCTCGGGCTTGCCCGGTCCGATTTGAATA ACGGGCAGTTATTCAAAGGAGAGGGGTGCAAGGAGTGCTTTGGCTCGGGCTACCGCGGCCGCCACGGCATTTACGAAATG ATGGTGATCAACAATCCGATTAAAAAGCAGATTGTGAAAAGCCCGGATGCCGTCGAATTGAGAAAGATCGCCCTTGAAAG CGGTATGTCGAGTTTGCTTTCTCACGGTTCCCATCTTGCCGCTGCCGGAGTTACGACAATTGCGGAAGTTCTTAGGGTGA CAAGAGGATTTGAGGAGGTGGAGTAA Protein sequence : MADNEASDEDQTLRRVLGGEDVNRSMAEQFGMEIYDDLTGYYAPSEVFKMLPYSFVKKHTLLPIKEEENLIVVAVSDPLN LDPLEEIRMLLGREVKAVYSPREMIELAIGERYDAETGAASEFIASLAKGREEGKDDEVEVYDLFDTSREQSPIIKLLNL ILTEAIQQGASDIHFEPQESGLRVRYRIDGVLQTRHSPSPELQAQLLARIKVMAKMDIAEHRLPQDGRIKLRMGRREIDF RVSTVPITGGERIVLRILDKGNVVIGLYSLGMLPEVFDEFKRMIKLPEGILLVTGPTGSGKTTTLYSAINEIYSDETNIM TIEDPVEYNLKGIAQIGVKPKINLTFAAGLRTILRQDPDVVMVGEIRDLETAQIAIQASLTGHLVMSTLHTNDAPSAITR LVDMGIEPYLLSSTIVGVLAQRLVRRICPDCSTAYKASDDEIKSLGLARSDLNNGQLFKGEGCKECFGSGYRGRHGIYEM MVINNPIKKQIVKSPDAVELRKIALESGMSSLLSHGSHLAAAGVTTIAEVLRVTRGFEEVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-98 | 47 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-98 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_003710256.1 | General secretion pathway protein E | VFG0182 | Protein | 5e-97 | 49 |
| gspE | YP_003710256.1 | General secretion pathway protein E | VFG1876 | Protein | 1e-91 | 47 |
| gspE | YP_003710256.1 | General secretion pathway protein E | VFG2048 | Protein | 8e-99 | 46 |
