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Name : gabD (wcw_1841) Accession : YP_003710186.1 Strain : Waddlia chondrophila WSU 86-1044 Genome accession: NC_014225 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1973833 - 1975278 bp Length : 1446 bp Strand : + Note : NAD-dependent aldehyde dehydrogenases DNA sequence : ATGAACATTGCTCAATTTTTAGACCAGCCTGCAATCGGCTTTTTTGTGGGAGGAAGCTTTTCTCCCTGCCGCCATGCCTT AACTGAAGATCTCATCAGTCCTTATACAAAAGAAAAATGGAAAAGCTACATCCCTGCTAATGAACAGGATGTCAAACATG CAATAACCACGGCTAAAAAAGCTTTTCCCATGTGGAAAAACACTCCCGCACCGGAAAGAGGGCGTCTTTTGCGCAAAATC GGAGACTTGCTCTTAGAAAACAGCAGCACTTTCGCCAATCTAATGGCGCATGAGATGGGCAAGCCGATCACTCAAGGCAA AGGGGAAGTGAGCTACACAGCAGGCTATTTTCATTGGTTTGCCAGCGAAGCGGAAAGAATATACGGCATGACGATCCCGT CCCAATTTCCTGCCAAAGAGCTGACAATTCAGTACGAGCCTGTAGGGATCTGCGCTGCGATTACCCCATGGAATTTCCCG ATTGCAATGGCAGGAAGAAAAATTGCCGCAGCACTTGCTGCCGGCTGCACAATCATCAACAAACCCAGCAGAGAAAGCCC TATTTCCATGCTGCTATTTGCTTACCTATGCCAAGCAGCTAACCTTCCGGAAGGGGTTGTCAATATCATTCCTGGTCCGG AAGAGATCATCGGCAAGGTCTTGCTCGCCTCATCCGATATACGCAAGCTTTCATTCACCGGAAGCACTGAGACGGGGAAA TATCTTTACCGCAAATCAGCAGACACATTGAAAAAGCTGACAATGGAATTGGGAGGGCACGCTCCTCTTCTGGTCTTCGA CGATGCAAACATCGACATTGCCGTCGCAGGAACAATTGCTTCAAAATTCCGCAACAACGGCCAAACCTGCGTTTGCCCTA ATCGCATTTTTGTGCAAAAAAGCATTTACAACGCTTTTCTCGATAAATTTGCCGAAGAGACGGCAAAATTGAAAGTCGGC GATCCCCTGGATCCTCAGTCCGATTTGTCACCCATTCTACATCCAACAGCTGAATCAAAGGTCAAAAAGCACATTGCCGA CGCACAAGAAAAGGGAGCTGAAATTATTTTGCAAGGAAGCTTCCCTTACGAGCCTTGCATCCTCAGCCAGGTGACGAGCG ACATGCTGATTTACAAAGAAGAGACATTCGGCCCAGTAGCGGCTGTCATCCCTTTTTCAACCGAACGAGAAGGAGTAGAA ATGGCAAACGATACCCCATTTGGCTTAGCCTCCTACTTTTTTTCACAAGATTTATCGCGCTGCAAACGAGTAGCCTCGGC TCTTCAATATGGCATTGTCGGGGTCAACGACCCTCTTCCCAGCACTTATCAAGCCTCATTTGGGGGAATCAAATCCTCCG GTTTCGGCCGTGAAGGGGGGCCGACAGCGATCAAAGAGTATCTGGTGGAGAAGTACATCTCAACATCAATAAATGCCGGG AATTAA Protein sequence : MNIAQFLDQPAIGFFVGGSFSPCRHALTEDLISPYTKEKWKSYIPANEQDVKHAITTAKKAFPMWKNTPAPERGRLLRKI GDLLLENSSTFANLMAHEMGKPITQGKGEVSYTAGYFHWFASEAERIYGMTIPSQFPAKELTIQYEPVGICAAITPWNFP IAMAGRKIAAALAAGCTIINKPSRESPISMLLFAYLCQAANLPEGVVNIIPGPEEIIGKVLLASSDIRKLSFTGSTETGK YLYRKSADTLKKLTMELGGHAPLLVFDDANIDIAVAGTIASKFRNNGQTCVCPNRIFVQKSIYNAFLDKFAEETAKLKVG DPLDPQSDLSPILHPTAESKVKKHIADAQEKGAEIILQGSFPYEPCILSQVTSDMLIYKEETFGPVAAVIPFSTEREGVE MANDTPFGLASYFFSQDLSRCKRVASALQYGIVGVNDPLPSTYQASFGGIKSSGFGREGGPTAIKEYLVEKYISTSINAG N |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-94 | 49 |
