Gene Information

Name : pdxS (wcw_1702)
Accession : YP_003710052.1
Strain : Waddlia chondrophila WSU 86-1044
Genome accession: NC_014225
Putative virulence/resistance : Unknown
Product : Pyridoxal biosynthesis lyase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : 4.-.-.-
Position : 1815461 - 1816354 bp
Length : 894 bp
Strand : -
Note : Pyridoxine biosynthesis enzyme

DNA sequence :
ATGGCAGAGGAAAAAATACAAAACTCTTTCGAGGTCAAAGTGGGGTTGGCCGAAATGCTCAAAGGAGGCGTAATTATGGA
CGTCACCAATGCTGAGCAAGCGAAAATTGCTGAAGAGGCTGGAGCTGTCGCTGTGATGGCTTTGGAGAAGATCCCTTCCG
ATATCAGGCAAGAGGGAGGCGTTGCCCGAATGACAAACCCTCTTTTCATCAAACAGATTCGGGAAGCTGTGTCTATTCCC
GTGATGGCAAAGTGTCGTATTGGGCATTTTGTTGAAGCGCAGATTCTAGAGGCTCTTGAGGTTGATTTTATTGACGAGAG
CGAAGTGCTGACGCCTGCGGATGAAAACTACCACATTGATAAGCATGGGTTTAAAGTTCCTTTCGTTTGCGGCGCTTGTA
ATCTTGGAGAAGCCTTGAGAAGGATTGGAGAAGGCGCTGCCATGATCCGTACTAAAGGAGAGCCTGGAACAGGCAACGTG
GTCGAGGCCGTGAGGCATATGCGGACGATCAATCAGCAGATGCGTGCGCTCGCAGCAAAAGATACTGCCGAATTAATGAC
TGAGGCGAAAGAGATGGGAGCTCCCTATCACTTGGTTAAAATGGTTGCGGAAACGGGAAAATTGCCTGTGCCGAATTTTT
CTGCGGGGGGAATTGCGACGCCTGCCGATGCTGCGTTGATGATGCAGTTGGGAGCGGAAACTGTTTTTGTCGGTTCGGGA
ATTTTTAAATCTGAAGATCCCAAAAACCGTGCACAAGCGATTGTCGCGGCTGCCACTTATTACGATGATCCGAAAATGTT
ATTAGAAGTGTCCTCCGGTTTATTGAGTGGAATGAAAGGGGTGGATATACGCAAACTGCGTCATGATGAGTTGATGGCAA
ATCGAGGCTGGTGA

Protein sequence :
MAEEKIQNSFEVKVGLAEMLKGGVIMDVTNAEQAKIAEEAGAVAVMALEKIPSDIRQEGGVARMTNPLFIKQIREAVSIP
VMAKCRIGHFVEAQILEALEVDFIDESEVLTPADENYHIDKHGFKVPFVCGACNLGEALRRIGEGAAMIRTKGEPGTGNV
VEAVRHMRTINQQMRALAAKDTAELMTEAKEMGAPYHLVKMVAETGKLPVPNFSAGGIATPADAALMMQLGAETVFVGSG
IFKSEDPKNRAQAIVAAATYYDDPKMLLEVSSGLLSGMKGVDIRKLRHDELMANRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-86 65
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-86 65
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-86 64