Gene Information

Name : pyk (wcw_1283)
Accession : YP_003709641.1
Strain : Waddlia chondrophila WSU 86-1044
Genome accession: NC_014225
Putative virulence/resistance : Virulence
Product : Pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1364578 - 1366386 bp
Length : 1809 bp
Strand : -
Note : -

DNA sequence :
ATGCTATCGGCTATTCTCAGTATAGTTAAGAGAGATAGGCTTATGGCTTGTAGAACAAAAATTATCTGCACAATAGGTCC
TGCTGTCAATACGTATGATAAAATTTGCGCATTGATCAAAGCGGGAATGAATGTCGCTAGGCTAAATTTTAGCCACGGGT
CTTATGAAGAGCATTTTTCCGTCATTGAAATGCTGAAGCGCGCCAGAAAGGAATTGCAGGTGCCTCTTGCGATTTTATTG
GATACAAGCGGGCCGGAAGTGCGTGTCGGTAAAATTCAAGATGGCGAGATAAAAGTTAACAAAGGGGAACGGTTAAGGCT
TCTCGACAAAGAAGTACTCGGCGGTAATGGAGTGATCTCGGTGAACCCCCCAGGAATCCTCAAAGGCCTTTCCGTTGGTG
CTCAAGTTTTATTTGATGATGGATATATTTCATCTCGTGTCAAGGAAGTTGCTGAGGAATGGGTTGAGTTAGAAATTGAG
AATTATGGAGTTTTGAAGGGGGGAAAGGGGGTCAATATCCCCAATGTGAGTTTGAATCTGCCTTCGGTCACTGAGAAAGA
TGTCAAAGATATTGAATTCGGGTGTAGAAATGGCATTGATTGGATAGCGGTTTCATTCGTCAGAACTCCAGAAAATATCA
TCACAGTGAAGAATTTGCTTGAATCGAACCGCTGTTCGCATGTCTTGGTGATTGCAAAAATTGAAAATCATGAAGGGATT
GAGCATTTCGATTCAATCCTGCAAATTTCAGATGGCGTGATGATTGCTCGCGGGGATTTGGGTGTTGAAATTCCTCTTAG
CCATGTTCCCCGTTTGCAAAAAGAGATGATTCGCAAATGCTATCTTGCAGGCAAACCTTCAGTGACAGCCACTCAAATGT
TGGAATCTATGATCAATAACCCTCGCCCTACACGGGCAGAAGTTTCTGATGTGGCGAATGCGATTTATGACAGTACGTCT
GCTGTGATGTTGTCAGGGGAGACGGCTATTGGAAAGTATCCGATTGAAGCAGTTGAAATGATGAGAGACATTATTTCCGA
AGCAGAGACGGATTTTGATTACCGTTCTCTTTTTGAGCTGCACTCTTCGATCAGCTATAATGATGTCCCTTCATCAGTTA
CCTTGGCTACGGTCAAAACCGCCTACAGTTCAGGAGCGAAGGCGATTTTCGCTTTCACAAGCGGCGGGGGAACAGCGCGT
CTGCTTTCTCGTTTGCGTCCAGAACTTCCTATCGTTGCGATGACCCCTAAGGAAAATTTTTATCATCAGCTTTCGTTGAA
TTGGGGAGTGATTCCCTTTTTGGGCAAGGAGTCGAAGACCTTTGAAGAGGGATTCGAGCAAGTGAGCCAATTTGCACTAA
AGAACCATATTCTCTCTTATGGAGATCTTGCCATTGCGACAGCCGGATCCACATTCGGCATCAAAGGAACAACAAATATG
ATGATTGTAGAGCACATCGGAGACGTGCTTGTGCGCGGCCATCTCGGAGAGGGTGAGAAGGTTTATGGAAATGTTAAATT
TTTACGCTCTCCTTCTGAAGGGTTGCAGCCGTATCATGTTAGAGGGGCTTTGATCGTTATCACCAAATGCGATGAGAGCT
ATCTTCCTTATATTCAAGAATCTGCGGGTGTTATTTTGCAGAATCACATCGATGACGAGGCTTCAGAGATGTTTGCCATC
GAGCAAGCAGGCCTTTTTCACAAGCCGACAATTGTCAGGGCAGATGCTGCGGCTTATATTTTGAAAGAAGGACAGCTTGT
GACTCTGGATCCCGGCAAAGCTTTGATTTACAAAGGTGTAGTGATTTAA

Protein sequence :
MLSAILSIVKRDRLMACRTKIICTIGPAVNTYDKICALIKAGMNVARLNFSHGSYEEHFSVIEMLKRARKELQVPLAILL
DTSGPEVRVGKIQDGEIKVNKGERLRLLDKEVLGGNGVISVNPPGILKGLSVGAQVLFDDGYISSRVKEVAEEWVELEIE
NYGVLKGGKGVNIPNVSLNLPSVTEKDVKDIEFGCRNGIDWIAVSFVRTPENIITVKNLLESNRCSHVLVIAKIENHEGI
EHFDSILQISDGVMIARGDLGVEIPLSHVPRLQKEMIRKCYLAGKPSVTATQMLESMINNPRPTRAEVSDVANAIYDSTS
AVMLSGETAIGKYPIEAVEMMRDIISEAETDFDYRSLFELHSSISYNDVPSSVTLATVKTAYSSGAKAIFAFTSGGGTAR
LLSRLRPELPIVAMTPKENFYHQLSLNWGVIPFLGKESKTFEEGFEQVSQFALKNHILSYGDLAIATAGSTFGIKGTTNM
MIVEHIGDVLVRGHLGEGEKVYGNVKFLRSPSEGLQPYHVRGALIVITKCDESYLPYIQESAGVILQNHIDDEASEMFAI
EQAGLFHKPTIVRADAAAYILKEGQLVTLDPGKALIYKGVVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-72 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-72 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-72 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-72 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_003709641.1 Pyruvate kinase VFG0479 Protein 9e-73 42