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Name : kdsB (wcw_1107) Accession : YP_003709470.1 Strain : Waddlia chondrophila WSU 86-1044 Genome accession: NC_014225 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1186562 - 1187299 bp Length : 738 bp Strand : + Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase DNA sequence : ATGACCTATCGAATTATTGGAATGATTCCTGCGCGCTATGGAAGTTCACGCTTCCCCGGAAAACCCCTCGTCGAAATATC CGGAAAATCTTTAATTCAAAGAACTTACGAAAATGCCCAACGCTGCAAACTTTTGCAGGAGATCTATGTCGCAACAGATG ACGATCGCATTTTTTCTCATGTCGAAGAATTTGGGGGAAAAGCGATCATGACTTCCTCAAATTGTCCCACAGGAACAGAG CGTTTAGCTGAAGCGATCCATCTAAATTTCAAGAACGTTGACATGATCATCAATATTCAAGGGGATGAGCCGCTTCTTGA ACCTTATGTGATTCAAAAGGTTGGAGAAATATTAATCAACGACCAGTCCGCTGTCATGTCGACGGCAGCGGTTAAAATTA GCACAGAAGAAGAGGCCCTCAGCCGCTCCGTCAACAAATGCGTCATAGATGCGCACGGCAACGCCTTATATTTTAGCCGG TCGCTCATTCCTGGGGGGCATTCCGGCAAGTGGGAGCCTGATACCACTTATTATAAACATTTGGGAATCTATGGCTATAG AAAGGATTTCCTGTTCCATTATGCCGAACTGGAAACGACTCCTCTTCAGTTGGCTGAAGACCTGGAACAGCTGAAAGTCC TCGAACACGGATTCAAGATAAAAGTCGCGGTAGTCGACAGTCATTCAATTGGCGTGGATACACCGGAAGATTTGATAAAA GTAGAACGGAAATTATGA Protein sequence : MTYRIIGMIPARYGSSRFPGKPLVEISGKSLIQRTYENAQRCKLLQEIYVATDDDRIFSHVEEFGGKAIMTSSNCPTGTE RLAEAIHLNFKNVDMIINIQGDEPLLEPYVIQKVGEILINDQSAVMSTAAVKISTEEEALSRSVNKCVIDAHGNALYFSR SLIPGGHSGKWEPDTTYYKHLGIYGYRKDFLFHYAELETTPLQLAEDLEQLKVLEHGFKIKVAVVDSHSIGVDTPEDLIK VERKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-38 | 43 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 4e-38 | 43 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 9e-39 | 43 |
