Gene Information

Name : Trad_0808 (Trad_0808)
Accession : YP_003704485.1
Strain : Truepera radiovictrix DSM 17093
Genome accession: NC_014221
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 875805 - 876509 bp
Length : 705 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: afo:Afer_1310 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C7LZT2 ABC transporter related; PF

DNA sequence : 
ATGCTGCAGCTTCAAGGGGTGGGGTACGCCTATCGCCTCAACGGTCGCCAGGTCAGGGTGCTGCAGGGCGTCACGCACAC
CTTTGAGCGGGGCAGCTTCTCGAGCCTCCGCGCCCCGTCGGGCTCGGGAAAGACGACGCTCCTCAACCTGCTGGGTCTGC
TGGACACGCCCACGGAGGGCCGTTACCTGGTCGAAGGCCGGGACACGCGGCACCTCACGGACGCTCAGAAGAGCAGCCTG
AGGGCCCGCACCTTCGGCTTTTTGTTCCAGAACTTCCGCCTCATCCCGACCCGTACGGTGTTAGAGAACGTCACCTTGGC
GCTCGACATCAGCGCGCAGGGGCCCAAGCGGGCGCAGCGGGAGGCGGCTCTAAGGGCGCTCGAGCAGGTCGGCCTAGCGG
GGCGCGCCGAGCACGTCCCTCCGGAGCTGTCGGGCGGCGAAGCGCAGCGGGTCGCGTTTGCTCGGGCGCTCGTCCGGCAA
CCCGAGGTGCTCCTGGCCGACGAACCGACCGGCAACTTAGACGCCGCCAACCGCGACCGGCTCCTCGACCTCATCTCGGC
CTTTCACGCCCGCGGCGGTACGGTGGTGATGGTCACGCACGACGACGTCGCGGCGGCGCGCGCGACGCACCCCTTGCGGC
TGGAGGCGCTCATGCCGGCGGCAGCCACCCCCCTCCCGGTGGCGCGCGCCGCCGCTAGAGGGTAG

Protein sequence : 
MLQLQGVGYAYRLNGRQVRVLQGVTHTFERGSFSSLRAPSGSGKTTLLNLLGLLDTPTEGRYLVEGRDTRHLTDAQKSSL
RARTFGFLFQNFRLIPTRTVLENVTLALDISAQGPKRAQREAALRALEQVGLAGRAEHVPPELSGGEAQRVAFARALVRQ
PEVLLADEPTGNLDAANRDRLLDLISAFHARGGTVVMVTHDDVAAARATHPLRLEALMPAAATPLPVARAAARG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-23 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 9e-13 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Trad_0808 YP_003704485.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-26 44
Trad_0808 YP_003704485.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Trad_0808 YP_003704485.1 ABC transporter-like protein VFG0869 Protein 1e-13 42