Gene Information

Name : Trad_0753 (Trad_0753)
Accession : YP_003704431.1
Strain : Truepera radiovictrix DSM 17093
Genome accession: NC_014221
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 821524 - 822186 bp
Length : 663 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: cvi:CV_4397 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q7NPU5 Probable ABC tran

DNA sequence : 
ATGATCGAGCTGCGAGGCGTGACCAAGCGTTACGGGCAGGGGCAGGCGGCGGTGCAGGCGCTTACGGACGTGAGCCTCGT
CGTTCCCGCCGGAAGCTACGTTGCCGTCACGGGACGGAGCGGCTCCGGTAAGTCGACGCTGCTAAGTATCGTCGGTTGCC
TCGAACGACCTACCTCGGGGGAGTATCGGCTTCTGGGGCAGCCTATCACCCGCGCGCCGGACCGTGAGCTGTCACGGCTA
CGCGCCCAGAGCTTTGGCTTTGTCTTTCAAGCGTTTCACCTGCTCCCTGAAAAGAGCGTGCTAGACAACGTCACGCTGCC
CCTGCGTTATGGCCGCCTGCCGAAAGCGGCGTGGCGCCGCCGTGCACGAGAGCTGCTGGGGCAAGTTGGGCTCGCTGAAC
GTATGGATAGTCGCCCCAGCCAGCTTTCAGGGGGTGAGCAGCAGCGCGTCGCTATCGCCAGGGCGCTGGCGAACGACCCT
AAAGTTTTACTTGCCGATGAACCGACCGGCAATCTAGACAGTCACACTCGGGACGAGATTATCGCCTTGCTCGAAGCAGA
GCATGCGCGGGGGAAAACGCTCTTGATCGTCACGCACGATGCGGAGCTAGCAGCTAGGGCGCAGGTGCGTTTAGCGCTGC
GCGACGGGTGCGTCGTGTTCTAG

Protein sequence : 
MIELRGVTKRYGQGQAAVQALTDVSLVVPAGSYVAVTGRSGSGKSTLLSIVGCLERPTSGEYRLLGQPITRAPDRELSRL
RAQSFGFVFQAFHLLPEKSVLDNVTLPLRYGRLPKAAWRRRARELLGQVGLAERMDSRPSQLSGGEQQRVAIARALANDP
KVLLADEPTGNLDSHTRDEIIALLEAEHARGKTLLIVTHDAELAARAQVRLALRDGCVVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-26 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 8e-32 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-26 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-26 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Trad_0753 YP_003704431.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-39 52
Trad_0753 YP_003704431.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-44 47
Trad_0753 YP_003704431.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-36 46
Trad_0753 YP_003704431.1 ABC transporter-like protein NC_012469.1.7686946. Protein 8e-28 41