Gene Information

Name : Trad_0480 (Trad_0480)
Accession : YP_003704160.1
Strain : Truepera radiovictrix DSM 17093
Genome accession: NC_014221
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 531544 - 532254 bp
Length : 711 bp
Strand : -
Note : COGs: COG0689 RNase PH; InterPro IPR001247:IPR015847:IPR020568:IPR002381; KEGG: dge:Dgeo_2086 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Q1IWK4 Ribonuclease PH; TIGRFAM: r

DNA sequence :
ATGAGAAAAGGTCGCCAACCCTTCCAGCTCCGCGAGATCCGCGTGACGCCGGGCTACAACCGCTTCGCCGAGGGCTCGGC
CCTGGTCGAGTGGGGCGACACCCGCGTGCTCGCCACCGTCACCGTGGAGAACAAGCTCCCGCCACACCTGCGCGGCAAAA
AGGGCCGCGTGGGGTGGCTCACCGCCGAGTACGCCATGCTCCCGCGCAGCACGGCCGAACGCACGCAGCGCGAACGCCTC
TACGCGGGGGGGCGGTCGCTCGAGATCCAGCGGCTGATCGGCCGGAGCCTGCGCAGCGTCACCGACCTCACGCTCTTTCA
CGGCCAGACGTTGACCGTTGACGTCGACGTGCTCCAGGCCGACGGCGGCACCCGCTGCGCGGGCATCTTGGCGGGGTACG
CGGCGCTGCACCACGCCGCCGGACGCCTCGTGCGCAAGGGCGCGCTCGACGAGTGGCCGCTCACGCACGAGGTCGCGGCG
GTGAGCGTCGGGGTCGTTCGGGGGGAGACGCTTTTAGACCTCGACTTTCACGAGGACGCGGCCGCGGAGATCGACCTCAA
CGTGGTCGCGACCGCCGACGGCAAGCTCGTCGAGGTCCAGGGCAGCGGGGAGGAGCGGCCGATCGACGCGGGGCGCTACG
TGGAGCTCGTCGCGCAGGGGATCAGCGCGGTGCAGGGGCTTTTGGCGCACGTGCGCGGGAGCTTCACGTGA

Protein sequence :
MRKGRQPFQLREIRVTPGYNRFAEGSALVEWGDTRVLATVTVENKLPPHLRGKKGRVGWLTAEYAMLPRSTAERTQRERL
YAGGRSLEIQRLIGRSLRSVTDLTLFHGQTLTVDVDVLQADGGTRCAGILAGYAALHHAAGRLVRKGALDEWPLTHEVAA
VSVGVVRGETLLDLDFHEDAAAEIDLNVVATADGKLVEVQGSGEERPIDAGRYVELVAQGISAVQGLLAHVRGSFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 8e-32 45