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Name : Trad_2960 (Trad_2960) Accession : YP_003706597.1 Strain : Truepera radiovictrix DSM 17093 Genome accession: NC_014221 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3222455 - 3223939 bp Length : 1485 bp Strand : + Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR018149:IPR002313:IPR012340:IPR006195:IPR 004365:IPR004364:IPR016027; KEGG: dge:Dgeo_0903 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helica DNA sequence : ATGGAGAAGTCCCTCAGCGAACAGCGCGCGCAGCGCCTGCGCAACCTAGACGCCCTCGCGGAGCGCGGGTTCGAGCGCTA CCCCTACCGTTACCGCCCCACGCACACCGCCGCCGCGTTGCACGCCGAGCACCCTAAAGCGGCGCTGCAACCCGGCGACA CCTTCCCGGGGGAGGTCACGGTCGCGGGCCGCGTGATGCTGCTGCGCGGCATGGGCAAAGCGACCTTCGCGACCCTGCAA GACGCTTCGGGGCAGATCCAGGCGTACTTTCAAAAGGACCACCTAGAGCACTACAACGCCCTTAAAAAGATAGACCTAGG CGACTGGCTCGAGGTCACGGGGACGCTCTTCGTCACCAAGACGGGCGAGCTCACCGTCCAGGCGCAGCGCTTTCGCCCCC TCGTCAAGTCGCTTCGGCCGCTGCCGGACAAGTTCCACGGCCTCGCCGACAAAGAGGTGCGCTACCGCCAGCGGCACCTC GACCTCTTGGTCTCGCCGGAGGTCAAGCGCGCCTTTGTGCTGCGCTCGCGGGCGGTGTCGTTTATCCGGCGCTACTTAGA CGACCTGGGCTTTTTAGAGGTCGAGACGCCCGTGCTGCAGAGCGTCCCCGGGGGCGCCGAGGCGCGGCCCTTTACAACGC ACCACAACGCCCTGTCGCACGACTTTCACCTGCGCATCTCCTTAGAGCTCTACCTCAAACGGCTGATCATCGGCGGTTTC GACGCGGTCTACGAGATCGGCCGCAACTTCCGCAACGAGGGGCTCTCGCCCAAGCACAACCCCGAGTACACCATGTTGGA GCTCTACTGGGCGGGCCGCGACTACGAGGACATCTTGGCCCTGGTCGAGGACATGTATAGCCGGCTCGTCGAGACGCTCA CGGGTTCGACCAAGCTCGTCTACCAGGGCGTCACGCTCGACTTCACCCCGCCCTGGCCGCGCGTCGACTACACGGGCGAG CTCAAAAAGCGCGCCGGGATGGACTTCGACCCCTTAGACGAGGCCAAGCTGCGCGACTGGGTGCGGGCGCACCACCCGCC CAAAGAGGGGCCGGCTTTGGCGGACAGGCCCCTCAACGAGGTGTACAACAAGCTCTACGACCTCTACCTCGAGCCCTGTA TCGAGCAGCCCACCTTCGTCATGGATCACCCGCTGGCCATTAGCCCGCTCGCCAAAGCCCACCGCACCCGCCCCGGTTTG GTCGAACGCTTCGAACCGGTCTGTATGGGCATGGAGCTCGGCAACGCCTTTAGCGAGCTCAACGACCCCCTGGAGCAGCG CGCGCGTTTCGAGGCGCAGCAGCGCTTACGTGAAGCGGGCGACGAGGAGGCGCACCCCTTGGACGAGGAGTTTTTGGCGG CCCTCGAGGTCGGCATGCCGCCCACGGGGGGTCTGGGGCTCGGTATCGACCGTCTGGCGATGCTCTTAGCCGACGCGCCC AGCATCCGCGACGTGATCTTGTTTCCGCTGCTGAAACCGGAGTAG Protein sequence : MEKSLSEQRAQRLRNLDALAERGFERYPYRYRPTHTAAALHAEHPKAALQPGDTFPGEVTVAGRVMLLRGMGKATFATLQ DASGQIQAYFQKDHLEHYNALKKIDLGDWLEVTGTLFVTKTGELTVQAQRFRPLVKSLRPLPDKFHGLADKEVRYRQRHL DLLVSPEVKRAFVLRSRAVSFIRRYLDDLGFLEVETPVLQSVPGGAEARPFTTHHNALSHDFHLRISLELYLKRLIIGGF DAVYEIGRNFRNEGLSPKHNPEYTMLELYWAGRDYEDILALVEDMYSRLVETLTGSTKLVYQGVTLDFTPPWPRVDYTGE LKKRAGMDFDPLDEAKLRDWVRAHHPPKEGPALADRPLNEVYNKLYDLYLEPCIEQPTFVMDHPLAISPLAKAHRTRPGL VERFEPVCMGMELGNAFSELNDPLEQRARFEAQQRLREAGDEEAHPLDEEFLAALEVGMPPTGGLGLGIDRLAMLLADAP SIRDVILFPLLKPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-88 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Trad_2960 | YP_003706597.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-88 | 46 |
