Gene Information

Name : Trad_2256 (Trad_2256)
Accession : YP_003705909.1
Strain : Truepera radiovictrix DSM 17093
Genome accession: NC_014221
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 2446980 - 2447765 bp
Length : 786 bp
Strand : -
Note : COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: sma:SAV_1340 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C8NXX6 ABC supe

DNA sequence : 
ATGAGCGCCGTTGCAACGACGGCGCCGGCGGTCGCCGCGCCCGTCCAGGCGCCAGCGCTCGAGCTCGTCGGCGTCTCCAA
GCGCTTCGGGGACTTCGAGGTGCTGCGCGACGTGTCGCTCACCGTCGCGCCGGGCGCGTTCGTCTCGCTGATCGGCCCCT
CGGGGAGCGGCAAGAGCACGCTTCTAGAGATCGCCGCGGGGCTGCTTAAGCCGAGTGCGGGGCGGGTGCTGCTCGGCGGC
CGCGCGCTCACCGCGCCGGGGGCCGCGGGGTACGTGCCGCAGGGCGATCACCTGCTGCCGTGGCGCACCCTTTTACACAA
CGTGATGCTGGGGCCGCAGGTCCGCGGGGTCGCGCGCCGCGAAGCGCTCGCCGAAGCGCGCGCGCTTTTGCAGCGCTTCG
GCTTAGGCGGTTTCGAGAACGCCTACCCGCACGAGCTCTCGGGGGGGATGCGGCAGCGCGCGGCGCTGCTGCGCGCGGTG
CTCTTCGAGCGCCGCCTGCTGATCCTCGACGAACCCTTGGGCGCGCTCGACGCGCTCACGCGCCTGAGCGTGCAGCGCTG
GCTCGCCGAACTCGTCGCCGCGTGCGGTGCGAGCGCCCTGCTCGTGACCCACGACGTCCGCGAGGCGCTGCTGTTGTCCG
ACACCATCTGCGTCCTCAGCCGGCCGCCGGCGCGCGTGCGGCTCCGCCTCGAGGTGCCGCTGCCGCGGCCGCGCCCCCCG
CAGGCGCTCGCCGAGCTCGCCGAGCTCGAGGCGACGCTACTTAGCGCGCTCTTGGAGCCCGCGTGA

Protein sequence : 
MSAVATTAPAVAAPVQAPALELVGVSKRFGDFEVLRDVSLTVAPGAFVSLIGPSGSGKSTLLEIAAGLLKPSAGRVLLGG
RALTAPGAAGYVPQGDHLLPWRTLLHNVMLGPQVRGVARREALAEARALLQRFGLGGFENAYPHELSGGMRQRAALLRAV
LFERRLLILDEPLGALDALTRLSVQRWLAELVAACGASALLVTHDVREALLLSDTICVLSRPPARVRLRLEVPLPRPRPP
QALAELAELEATLLSALLEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-29 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Trad_2256 YP_003705909.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-16 41